Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq185 201 3e-46 seq20 150 4e-31 seq10 96.9 8e-15 >seq185 Length=33376 Score = 201 bits (222), Expect = 3e-46 Identities = 168/206 (82%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959 || ||||| ||||| || |||||||| || |||||||| ||||||| |||||| | ||| Sbjct 1379 CTAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCA 1438 Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019 || || |||||||| || ||||||||||| || || || ||||| |||| |||||||||| Sbjct 1439 TCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTG 1498 Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079 ||||||||||| || ||||| |||||||||||||| || ||||| || ||||| Sbjct 1499 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATG 1558 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| |||||||| |||||||| || Sbjct 1559 GTCTTACCCGTGAGGGTCTTTACGAA 1584 >seq20 Length=177425 Score = 150 bits (166), Expect = 4e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || |||| || || || ||||| || ||||| || |||||||| || |||| ||||| Sbjct 96239 CGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTT 96298 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||| || || |||||||| || |||||||| | || || || |||||||| | || Sbjct 96299 CGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGGATACCC 96358 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||||||||| || ||||| ||||| || || || |||||||||||| Sbjct 96359 TCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACCTCGAGA 96418 Query 211074 GTGATCGTCTTTCCCGTGAGA 211094 ||||| ||||||||||| ||| Sbjct 96419 GTGATGGTCTTTCCCGTAAGA 96439 Score = 132 bits (146), Expect = 1e-25 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || |||| ||||| | ||| || || |||||||| || |||||||| Sbjct 96636 TTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATC 96695 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || || |||||||| | || ||||| ||||||||||| || ||||| ||| Sbjct 96696 AATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 96755 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 || || || || ||||||||||||||||| ||||||||||| ||| Sbjct 96756 ATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAGA 96803 >seq10 Length=266483 Score = 96.9 bits (106), Expect = 8e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || |||| |||||| | ||| || || |||||||| || |||||||| Sbjct 190675 TTCTGGATGTTGTAGTCCGAAAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATG 190734 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029 || || || || ||||| |||| ||| ||||||||||| |||| Sbjct 190735 AGTCGCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTGAATCT 190777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146876185925