Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq185 163 7e-35 seq20 131 4e-25 seq10 91.5 4e-13 >seq185 Length=33376 Score = 163 bits (180), Expect = 7e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 || ||||| || || ||||| || || || |||||||| |||||||| || |||||| Sbjct 1587 ATCTTCGTAAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACC 1528 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 ||||| |||||||| ||||| |||||||| |||||||| || || || ||||| ||| Sbjct 1527 ATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGATCAGCAGCGA 1468 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 |||||||||||||| || |||||||| ||||| | || ||| | ||||| ||| |||| Sbjct 1467 CTTATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCGGATTACAACATCCAG 1408 Query 178107 AAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || Sbjct 1407 AAGGAGTCCACCCTCCACCTCGT 1385 >seq20 Length=177425 Score = 131 bits (144), Expect = 4e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 177941 TCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAA 178000 ||| || ||||| || ||||| |||||||| || || || || ||||| |||||||| Sbjct 96439 TCTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACGTCAA 96380 Query 178001 ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGG 178060 ||||| ||||| || || || |||||||| || ||||| ||| | ||||||||||| Sbjct 96379 GGCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGG 96320 Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120 ||| ||||| || || ||| | || || | || || ||| |||| || || || || || Sbjct 96319 AAAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGGAGTCTACCCT 96260 Query 178121 GCATCTTGTTTTGAGACTCAGA 178142 ||||| ||| | ||||| || Sbjct 96259 TCATCTCGTTCTTCGACTCCGA 96238 Score = 114 bits (126), Expect = 3e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 177941 TCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAA 178000 ||| || ||||| || ||||| |||||||| || || || || ||||| |||||||| Sbjct 96803 TCTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACGTCAA 96744 Query 178001 ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGG 178060 ||||| ||||| || || || |||||||| || ||||| ||| | ||||||||||| Sbjct 96743 GGCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGG 96684 Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||| ||||| || || ||| | || || | || || ||| |||| || Sbjct 96683 AAAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAA 96636 >seq10 Length=266483 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 ||||||||||||| || ||||| || || || ||||| ||||| |||||||||||||| | Sbjct 190777 AGATTCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGACTCATCTTCGCCGGAAAGC 190718 Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||| || || ||| | || ||| | || || ||| |||| || Sbjct 190717 AGCTTGAGGACGGACGAACCCTTTCGGACTACAACATCCAGAA 190675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725879131930