Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 129 1e-24 seq131 84.2 5e-11 >seq1 Length=2640167 Score = 129 bits (142), Expect = 1e-24 Identities = 148/195 (76%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 230441 GTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGAC 230499 ||||| || |||||||||||| | | || ||| | || |||||||| ||||| |||||| Sbjct 596359 GTCGCGCTCATTGGCATGAACTCGAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGAC 596300 Query 230500 CGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTT 230559 || | | || || || ||| ||||||| || |||||| | | |||||||||| || Sbjct 596299 CGTCTGCTCGTCGCGCTCGGTGACGAGAAGGTCTACAACGCGACCAACCCCTTTGACTTC 596240 Query 230560 ATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA- 230618 ||||| | || ||||| || || ||||||||||||||||| ||||| || ||||| Sbjct 596239 ATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGGGTGTCCGACTAC 596180 Query 230619 TCAGAGGCCTGGTGT 230633 || ||| ||||||| Sbjct 596179 TCCAAGG-CTGGTGT 596166 Score = 87.8 bits (96), Expect = 4e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || || |||||||||| || ||| | ||||||||||| || || || || || | Sbjct 599526 CTCATCGGTATGAACGCTGCTCTGATGCGCCAGTACATCGAGTTTGTCGCAGATCGGCTC 599585 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 || || | || || ||||||| |||||| | | ||| || || | || ||||| Sbjct 599586 TTGGTCTCCCTAGGCAACGAGAAGCACTACAACGCGACGAATCCGTTCGACTTCATGGAC 599645 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 | || || || || || ||||| ||||| ||||| ||||| || |||||||||| Sbjct 599646 TTGATATCACTCCAGGGCAAGACAAACTTTTTCGAGAAGCGAGTGTCGGACTATCAGA 599703 >seq131 Length=1833636 Score = 84.2 bits (92), Expect = 5e-11 Identities = 171/254 (67%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 319777 ATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCA 319836 ||||| || | || || |||| | || || ||||||| ||||| || ||||| Sbjct 1423606 ATGAACTCGAGGACAGAGGTGTCGGCCTCAGAGCCGTCGATGTCGTGCTCGACGTAGAAG 1423665 Query 319837 GTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATC 319896 || | | |||| || ||||| || || | ||||||||| ||||||||||| Sbjct 1423666 GTGCGGACCTCGTCCGGCGACGGGAAGCCCTCGACCTGGCCGTTGGTGATAGCGCGCATG 1423725 Query 319897 AGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGG 319956 ||||| || || || | ||||| | || || ||||||||||||| || || || ||| Sbjct 1423726 AGGGTCGACTTGCCAGTACCGTTGCGACCGCAGAGACCGTAGCGGTGACCACGCTTAAGG 1423785 Query 319957 TTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCA 320016 || | | |||| || || || || |||| || || || || || | || | Sbjct 1423786 CGGAGGGTAGCGGTGTTGAGCAGGATCTTGGCACCGTAGGCGAGCGAGAACTGGCAGTTG 1423845 Query 320017 CACAGATCCTCACC 320030 || ||||||||||| Sbjct 1423846 CAAAGATCCTCACC 1423859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821641713620