Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 188 7e-43 >seq1 Length=2640167 Score = 188 bits (208), Expect = 7e-43 Identities = 379/560 (68%), Gaps = 3/560 (1%) Strand=Plus/Plus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 || || ||||| ||| || | |||||||| |||||||| || ||||| || || || Sbjct 596517 AGGCAGGCGAAGTCGGTGTGCATGCCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTG 596576 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | |||||||| ||| || ||||| | ||| || || | ||||| || ||||| ||| Sbjct 596577 AGACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAG 596636 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || ||||||||||||| || ||||||| | || || ||| | | | | |||| | Sbjct 596637 AAGATACCCTCGACGGCGGCGAACGCGACAAGGCGCTCAGCGAAGGAAGATTTCTTGTCA 596696 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200 ||||| | |||| ||||| || | ||| ||||| || || || ||||| Sbjct 596697 GAGATCCAGCGGAGGGCCCAATCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCG 596756 Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260 | || | | ||| | || |||| | || ||||| || ||||| ||| |||| Sbjct 596757 TCGAACAGGTGCTCGCGCTGCTTCGGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTAC 596816 Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320 | |||||||| ||||||||||| ||||| || ||||| ||||| ||||| || || Sbjct 596817 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCG 596876 Query 17321 ATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCG 17380 | || || || | ||| || || | || |||||||| || || |||||| |||| Sbjct 596877 ACCTGCACCTCGTTGCTGAAACGCTCGACGAGGTTTTCGTTGACAATACCGTCGGACGCG 596936 Query 17381 GCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT--CCGGTG-TAAGAACGCGC 17437 ||||| || || | | |||| ||||| ||| |||| || || | | | | Sbjct 596937 GCGAAGAAGGCGAGGACATGCGAGATGAAGTATCGCTCGTTGTCGTTGAGACGGTTGGTC 596996 Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497 ||||| | | ||| ||||| | |||| || || | |||||| || ||| | ||| Sbjct 596997 CAGTCGTGAAGATCCTTGGAGAGGTCCATCTCCTCAGCGGTCCAGAACGAGGCCTCGGCC 597056 Query 17498 TTTTTATACATATTCCAAAT 17517 || || ||||| | |||||| Sbjct 597057 TTCTTGTACATTTGCCAAAT 597076 Score = 131 bits (144), Expect = 2e-25 Identities = 301/453 (66%), Gaps = 8/453 (2%) Strand=Plus/Minus Query 16943 TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATA 17002 || || || | ||||| || || || || ||| || | ||||||||||||||||| Sbjct 599384 TTGAGGTGGTGAAACAAGAGGCACGCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATG 599325 Query 17003 AGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCG 17062 || || || || || || | |||||||| || || ||||| | ||| ||||| | Sbjct 599324 AGCTCATTCGAGAAGGTGAGGCCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGAC 599265 Query 17063 GCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCG 17122 || || || || |||||||| || ||||| | |||||||||| | | |||| || Sbjct 599264 GCAAAACTTCCCGAGAAGAATATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCG 599205 Query 17123 TACG----TCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTAT 17178 | | |||| | | || | |||| | | |||| ||||| || | ||| || Sbjct 599204 AATGATGATCGCTTGTCTGAGA----TCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGAT 599149 Query 17179 GCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATA 17238 ||| || || ||||| || | || | ||| || || |||| | || || Sbjct 599148 GCACGGGATGGTCTCTATCGCGTCGAACAGAAACTCGCGCTCTTGAGGGTCCTTGATGTA 599089 Query 17239 CGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCC 17298 || || || || ||| || | || || |||||||||||||| |||||| || || Sbjct 599088 GGTGTCAATTAGGAGGGAATATGTCTCCGAATGTATGTTCTCCATCATTATCTGGAAGCC 599029 Query 17299 GTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTC 17358 ||| ||||| || ||||| || || || || |||| ||||| | || || || Sbjct 599028 GTAGAAGCAACGAGCTTCTGCAGCCTGTACCTCGTTTGAGAAGCGTTCAACGAGGTTCTC 598969 Query 17359 GTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||| || ||||||||| ||||||||| || || Sbjct 598968 GTTTACAATGCCGTCGGACGCGGCGAAGAATGC 598936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544474338320