Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1 105 7e-18 >seq1 Length=2640167 Score = 105 bits (116), Expect = 7e-18 Identities = 284/432 (66%), Gaps = 2/432 (0%) Strand=Plus/Minus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 || ||||| | ||||| || ||||| |||||| || | || |||||||||||||| Sbjct 599384 TTGAGGTGGTGAAACAAGAGGCACGCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATG 599325 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA 16300 || || || || || || | || ||||| || || ||||| | ||||||||| | Sbjct 599324 AGCTCATTCGAGAAGGTGAGGCCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGAC 599265 Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 ||||| ||||| |||||||| || || || | ||||| |||| || | || ||| Sbjct 599264 GCAAAACTTCCCGAGAAGAATATTCCTTCGACCGCAGCAAACGCGA-CAAGCCTTTCGCC 599206 Query 16361 TACGTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACA 16419 | | ||| | | || ||||| | | |||| ||||| || | || || || Sbjct 599205 GAATGATGATCGCTTGTCTGAGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCA 599146 Query 16420 ATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGT 16479 || || ||||| || | |||| ||| || ||| || | || || || Sbjct 599145 CGGGATGGTCTCTATCGCGTCGAACAGAAACTCGCGCTCTTGAGGGTCCTTGATGTAGGT 599086 Query 16480 ATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATA 16539 ||||| || | || | || || ||||||||||| || |||||| || || || Sbjct 599085 GTCAATTAGGAGGGAATATGTCTCCGAATGTATGTTCTCCATCATTATCTGGAAGCCGTA 599026 Query 16540 GAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATT 16599 |||||| ||||| || || ||||| || | || ||||| | |||||||| || Sbjct 599025 GAAGCAACGAGCTTCTGCAGCCTGTACCTCGTTTGAGAAGCGTTCAACGAGGTTCTCGTT 598966 Query 16600 CACGATACCGTC 16611 || || ||||| Sbjct 598965 TACAATGCCGTC 598954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413287673680