Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq87 161 1e-34 >seq87 Length=2533944 Score = 161 bits (178), Expect = 1e-34 Identities = 246/345 (71%), Gaps = 8/345 (2%) Strand=Plus/Minus Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTC-TTGATCTCCC 145981 || |||||||| || | |||| || ||| | | | ||||| ||||| ||||||| || Sbjct 243199 GCAGGGTTCCATGCACTTAGGATGATCCTGCGGTCCGTCGGG--TCCTCCTTGATCTTCC 243142 Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGT 146041 || ||||| |||||||| || ||||| ||| ||| || |||| | | || |||| Sbjct 243141 GGATGCACTCCCTCAGCTGGTCGACTCCCTGTCCCGTGTAGTCCGTCTCGCAATCGACGT 243082 Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCC 146101 || || || ||||| | ||| ||||| ||||| ||||| || ||||| || | Sbjct 243081 ACTTTGCGCCAAAGTGACGCCATTGGAAGCCGTACACGGGGCCGAGGTCACCTTCGCGGC 243022 Query 146102 TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGA 146161 ||| ||||||||| | || ||||| ||| || ||||| ||||||||||||||| Sbjct 243021 GGTGTCCCAGCCCGCGCGACGCAAGGAACTCCTTCGAGCCGTTTCCGTCCCAGATCTTGA 242962 Query 146162 CGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTG--ATGAACCAGAGCAGCTC 146219 ||||| |||| ||||| || | |||||| | | |||| | |||||||||| ||| Sbjct 242961 CGCCCTTCGCAGAGAGGAGCTTTGCGTCCGTTG--CACCTGCAACAAACCAGAGCAACTC 242904 Query 146220 TTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 |||| || || | | |||| || ||| ||||||||||| || Sbjct 242903 CTCGATGATTCCGCGCAGGAAGGTCCGCTTTGTGGTCAGCAGCGG 242859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075516582960