Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq98 104 2e-17 seq120 98.7 8e-16 >seq98 Length=2497588 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||| | ||||||||||| || ||||||||||| | ||||| | | ||| Sbjct 2388695 AGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAAAGGGTACGCCCATCC 2388636 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || || || || |||||| | || | | ||||||||| ||| | || |||||||| Sbjct 2388635 TCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 2388576 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | ||| |||||| | |||| |||| || |||||| Sbjct 2388575 TGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACCTCCAGAGTGATGGTC 2388516 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || ||||| || || || |||||||| Sbjct 2388515 TTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| |||||||| || ||||||||||| | || || || | ||||| ||||| ||||| Sbjct 2387944 AGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCC 2387885 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| | || || | || ||||| ||| | |||||||||||| |||||| || Sbjct 2387884 CGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTCGCCTT 2387825 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 ||| | | | | || || | ||| ||| | ||| || |||||||| || | || Sbjct 2387824 CACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCCGTGAGGGT 2387765 Query 21158 TTTGACAAATATTTGCATT 21176 ||||| || || |||||| Sbjct 2387764 CTTGACGAAGATCTGCATT 2387746 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| | ||||||||| ||| ||||| Sbjct 2388224 GTGGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGTCCGTCCTCCAACTGCTTGCCA 2388165 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | || || || || | ||| ||||| || |||||| ||| Sbjct 2388164 GCGAAGATGAGGCGTTGTTGATCTGGCGGGATGCCCTCCTTATCCTGGATCTTCGCCTTC 2388105 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||||| | ||| |||| ||| |||||||||||||| | || Sbjct 2388104 ACGTTGTCAATCGTATCCGACGACTCGACCTCCAAGGTGATGGTCTTGCCGGTAAGTGTC 2388045 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 2388044 TTGACAAAGATCTGCAT 2388028 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| || |||| |||||| | ||||||| ||||| ||||| Sbjct 2388452 GTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCA 2388393 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | | ||| || || || | ||| |||||||| ||||| || Sbjct 2388392 GCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTG 2388333 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| ||| || | ||| |||| ||||||||||||||||| | || Sbjct 2388332 ACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTGCCGGTAAGGGTC 2388273 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 2388272 TTGACAAAGATCTGCAT 2388256 >seq120 Length=2004100 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 20984 CTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATA 21043 |||||| || ||||| ||||| | ||||| | ||||||| || || ||||| || | Sbjct 1878683 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAA 1878742 Query 21044 AATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTG 21103 || || | ||||||||| || | |||||||||||| ||||||| || || | Sbjct 1878743 GATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTT 1878802 Query 21104 GCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163 | ||| || || | ||| || | |||||| ||||||||||| | ||| ||||| Sbjct 1878803 GTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGAC 1878862 Query 21164 AAATATTTGCAT 21175 ||| |||||||| Sbjct 1878863 AAAGATTTGCAT 1878874 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| || || | ||||| || | ||||| ||||| ||||| Sbjct 1879746 GTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 1879805 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| || | ||| |||||||| |||||| || Sbjct 1879806 GCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1879865 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| ||| ||| || ||| || | ||| ||||||||||| || | || Sbjct 1879866 ACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAGTC 1879925 Query 21159 TTGACAAATATTTGCAT 21175 || || ||||| ||||| Sbjct 1879926 TTCACGAATATCTGCAT 1879942 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| |||||||| ||||||| || || | ||||||||||||| || || Sbjct 1878961 GTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCA 1879020 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| || | ||||||||| ||| | ||| |||||||| |||||| || Sbjct 1879021 GCA-AAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTG 1879079 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||||| | ||| || | || || ||||||||||| | ||| Sbjct 1879080 ACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTC 1879139 Query 21159 TTGACAAATATTTGCAT 21175 || || || |||||||| Sbjct 1879140 TTCACGAAGATTTGCAT 1879156 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 |||||| ||||| |||||||| || || | || || || ||||||| ||||| ||||| Sbjct 1879465 AGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTGCTTGCC 1879524 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| |||| || | |||||||||| || | |||||||||||| |||||| || Sbjct 1879525 AGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 1879584 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 ||| | | | || || | || || | || ||||||||||| || | || Sbjct 1879585 CACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGT 1879644 Query 21158 TTTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 1879645 CTTGACAAAGATCTGCAT 1879662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258304546584