Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 387 1e-102 seq120 154 2e-32 seq98 138 1e-27 seq79 104 2e-17 seq46 95.1 1e-14 >seq1 Length=2640167 Score = 387 bits (428), Expect = 1e-102 Identities = 472/642 (74%), Gaps = 9/642 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| ||||||||||||| |||||| ||||||| Sbjct 597076 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCTGAGGAGATGGACCTC 597017 Query 116696 TCCAAGGACACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | || | |||||||||||||| | |||||| | Sbjct 597016 TCCAAGGATCTTCACGACTGGACCAACCGTCTCAACGACAACGAGCGATACTTCATCTCG 596957 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || ||||| |||||||| |||||| || |||||||| || || ||||||||| Sbjct 596956 CATGTCCTCGCCTTCTTCGCCGCGTCCGACGGTATTGTCAACGAAAACCTCGTCGAGCGT 596897 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||||||||| || ||||| || |||||||||||||| |||||| ||| Sbjct 596896 TTCAGCAACGAGGTGCAGGTCGCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 596837 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 |||||| | ||||| || | ||| || ||||| ||||||||| | || || Sbjct 596836 GAGAACATCCACTCCGAGACGTACTCCCTGCTCATTGACACGTACATCAAAGACCCGAAG 596777 Query 116933 GAG---AAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 || ||| || |||| ||||||||||||| || || ||| | || |||||||| Sbjct 596776 CAGCGCGAGCACC---TGTTCGACGCCATCGAGACCATCCCCTGCATTAAGAAGAAGGCC 596720 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| || ||||||||| | | || | | |||||| |||||||| || || Sbjct 596719 GATTGGGCCCTCCGCTGGATCTCTGACAAGAAATCTTCCTTCGCTGAGCGCCTTGTCGCG 596660 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| ||||||||||| ||||||| || || ||||| |||| || ||||||||| Sbjct 596659 TTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCGTCCATCTTCTGGCTCAAG 596600 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || || ||||||||||| || || ||| |||||||||||| |||||||||||| Sbjct 596599 AAGCGTGGACTCATGCCCGGTCTCACCTTCTCGAACGAGCTCATCAGCAGGGACGAGGGC 596540 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 |||| |||||| ||||| | || ||| ||| | | ||| ||| | | | Sbjct 596539 ATGCACACCGACTTCGCCTGCCTCCTCTTCTCGCACCTCAAGAGGCGGCCGCACCCTGAC 596480 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAG 117271 |||| | ||||||||| || || ||||| ||||||||| Sbjct 596479 GTCGTCCGCAGGATCGTCACGGAGGCCGTCGCGATCGAGCAG 596438 Score = 288 bits (318), Expect = 1e-72 Identities = 450/639 (70%), Gaps = 11/639 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||||||||| || ||||| ||||||||||| | || ||| |||||||| Sbjct 598807 ATCTGGCAGATGTACAAAAAAGCAGAGGCCTCGTTCTGGACAGCAGAAGAGCTGGACCTG 598866 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752 | ||| | |||||| | | | | | | ||||||||| ||||||| Sbjct 598867 GGGCATGACCTCATGGACTGGAACGACAAACTCACCCAGGACGAGCGCCGTTTCATCTCC 598926 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || |||||||| ||||||||| || |||||||| || || || || Sbjct 598927 CACGTCCTTGCATTCTTCGCCGCGTCCGACGGCATTGTAAACGAGAACCTCGTTGAACGC 598986 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | ||||| |||| || || || || |||||||||||||| ||||| ||| Sbjct 598987 TTCTCAAACGAGGTACAGGCTGCAGAAGCTCGTTGCTTCTACGGCTTCCAGATAATGATG 599046 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 |||||| | || ||||| | ||||| ||| || ||||| ||| | | | || Sbjct 599047 GAGAACATACATTCGGAGACATATTCCCTCCTAATTGACACCTACATCAAGGACCCTCAA 599106 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 ||| || | | |||| |||| || ||||| || |||||| |||| |||||||| Sbjct 599107 GAGCGCGAGTTTC---TGTTCGACGCGATAGAGACCATCCCGTGCATCAAGAAGAAGGCC 599163 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC-TTCGGCGAGCGCCTGGTGGC 117048 || ||||| |||||||||||| | | || || | | | |||||||| | || || || Sbjct 599164 GACTGGGCCCTGCGCTGGATCTCAGACA-AGCGATCATCATTCGGCGAAAGGCTTGTCGC 599222 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 || || || ||||| || | ||||| ||||| ||||| || | ||||| |||||||| Sbjct 599223 GTTTGCTGCGGTCGAAGGAATATTCTTCTCGGGAAGTTTTGCGTCAATATTCTGGCTCAA 599282 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| || || |||||||||||||| || ||| || ||||||||| ||| |||||||| Sbjct 599283 GAAGCGGGGGCTCATGCCCGGCCTCACCTTCTCGAATGAGCTCATCAGCAGAGACGAGGG 599342 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC 117228 |||| ||||||||| || | |||| | || | | | | || ||| Sbjct 599343 CATGCACACCGACTTTGCGTGCCTCTTGTTTCACCACCTCAAGAGGAGGCCACATCCGGA 599402 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGA 117267 |||| || |||||||||||| ||||| || ||||| Sbjct 599403 CGTCGTCCAGGCGATCGTCACCGAGGCGGTTGCAATCGA 599441 >seq120 Length=2004100 Score = 154 bits (170), Expect = 2e-32 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| || || ||||||||||| ||||||||| |||| ||||| || | Sbjct 1879942 ATGCAGATATTCGTGAAGACTCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 1879883 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| |||||||| || | ||||| Sbjct 1879882 GACACTATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCAGACCA 1879824 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || ||||| ||||| || || | ||||||||| ||| ||||| Sbjct 1879823 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGATTACAA 1879764 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||||| |||| || || || Sbjct 1879763 CATCCAGAAGGAGTCCACCCTCCACCT 1879737 Score = 149 bits (164), Expect = 6e-31 Identities = 161/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || |||||||| ||||| || || ||| |||| || || | || Sbjct 1878874 ATGCAAATCTTTGTCAAGACGCTCACCGGCAAGACGATTACCCTCGAGGTTGAGTCTTCC 1878815 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||| || | ||||| || |||||||| | ||||| Sbjct 1878814 GACACGATCGACAACG-TCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCA 1878756 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| || || || |||| ||| |||||| ||||||||| Sbjct 1878755 GCAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGGCGTACCCTCTCCGACTACAA 1878696 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| |||||| || || ||| Sbjct 1878695 CATCCAGAAGGAGAGCACGCTTCACCTCGTG 1878665 Score = 114 bits (126), Expect = 1e-20 Identities = 152/207 (73%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||||| || ||||| || ||||| |||| ||||| | | Sbjct 1879156 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCTTCG 1879097 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||||| || || | ||||| |||||||| ||| | ||||| Sbjct 1879096 GATACCATTGACAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 1879038 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || || || |||||||| |||| ||||| || |||||||| Sbjct 1879037 GCAGCGCCTGATTTT-GCTGGTAAGCAGCTGGAGGACGGTCGCACTCTTTCGGACTACAA 1878979 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||| ||||||||| | || || || || Sbjct 1878978 CATTCAGAAGGAGTCTACCCTTCACCT 1878952 >seq98 Length=2497588 Score = 138 bits (152), Expect = 1e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||||||||| || |||||| | || ||||| | | Sbjct 2387746 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTTGAAGTCGAGTCATC 2387805 Query 40749 CGACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || |||| | |||| || || | ||||| || ||||| ||| | |||| Sbjct 2387806 GGACACCATTGACAACG-TGAAGGCGAAGATCCAAGACAAGGAAGGCATTCCCCCAGACC 2387864 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | ||||| ||||||| ||||||||| ||||| || || | ||||| ||| |||||| | Sbjct 2387865 AACAACGCCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTATA 2387924 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||||| | || || || || Sbjct 2387925 ACATCCAGAAGGAGTCTACTCTTCACCT 2387952 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || ||||| | | Sbjct 2388028 ATGCAGATCTTTGTCAAGACACTTACCGGCAAGACCATCACCTTGGAGGTCGAGTCGTCG 2388087 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || |||| | |||| || || | || || ||||||||||| | || || Sbjct 2388088 GATACGATTGACAACG-TGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCGCCAGATCA 2388146 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| ||||| ||| |||| |||| |||||||| ||||||||| Sbjct 2388147 ACAACGCCTCATCTTCGCTGGCAAGCAGTTGGAGGACGGACGCACCCTATCCGACTACAA 2388206 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||||||| ||||| || Sbjct 2388207 CATCCAGAAGGAGTCCACGCTTCATCTCGT 2388236 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||| || | || ||||| | || Sbjct 2388256 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTGGAGGTCGAGTCGTCC 2388315 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| ||||||||||| | || || Sbjct 2388316 GACACTATCGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCACCTGATCA 2388374 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | |||| ||| ||||| ||||| || |||| |||||||| || ||||| Sbjct 2388375 ACAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGATTACAA 2388434 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | ||||| || || || | ||| | | ||||| Sbjct 2388435 CATCCAGAAGGAGTCGACGCTCCACCTTGTCCTCCGCCTCCGCGGCGG 2388482 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||| | ||||| || |||||||| | || || || | | Sbjct 2388484 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAGACCATCACTCTGGAGGTGGAGTCTTCT 2388543 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | |||||| || || | ||||| ||||| || ||| | |||||| Sbjct 2388544 GATACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 2388603 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||||| || || || || || | ||| ||||| ||||| ||| Sbjct 2388604 CAGCGGTTGATCTTTGCGGGGAAGCAACTTGAGGATGGGCGTACCCTTTCAGACTATAAC 2388663 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||||||| ||||||| ||||| ||| | ||| Sbjct 2388664 ATCCAGAAGGAGTCCACGCTCCATCTCGTGCTTCGC 2388699 Score = 82.4 bits (90), Expect = 8e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 |||||| | || ||||| || ||||||| || || || ||||| || |||| ||||| Sbjct 2387624 ATCCCCCCTGATCAGCAGCGCCTCATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGCACG 2387683 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || |||||||||||||||||| ||| | ||||| || || || |||| Sbjct 2387684 CTGTCCGACTACAACATCCAGAAAGAGTCGACGCTTCACCTCGTTCTGCG 2387733 >seq79 Length=745021 Score = 104 bits (114), Expect = 2e-17 Identities = 83/100 (83%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| | ||||| |||||||| |||| ||| ||||| ||||| || || | |||| Sbjct 401350 GCATCCCCCCAGACCAACAACGACTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCA 401291 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| | |||||||||||||||||||||| |||| || || Sbjct 401290 CCCTGAGCGACTACAACATCCAGAAGGAGTCCACCCTCCA 401251 >seq46 Length=919979 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| | |||||||| || || |||| ||||||||| ||||| || |||| |||| Sbjct 474028 GCATCCCCCCAGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCA 474087 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 | ||| ||||||||||| ||||||||| | || || || || ||| Sbjct 474088 CTCTCTCTGACTACAACATTCAGAAGGAGTCGACCCTCCACCTCGTG 474134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218079398240