Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq120 131 1e-25 seq98 118 9e-22 seq79 84.2 2e-11 >seq120 Length=2004100 Score = 131 bits (144), Expect = 1e-25 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 118529 CACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 ||||||| |||| || ||||| || || |||||||||||| | ||||| ||||| Sbjct 1879732 CACCAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCT 1879791 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | ||||| || || || |||||||||||||||| || || || |||||||||||||| Sbjct 1879792 CAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCT 1879851 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | |||| ||||| | | ||||||||||| ||| | || | Sbjct 1879852 GGATCTTGGCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCT 1879911 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| || ||||| || || || ||||||||| Sbjct 1879912 TGCCCGTGAGAGTCTTCACGAATATCTGCATG 1879943 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| |||||||| || ||||| |||||||| | ||||| ||| |||||||| Sbjct 1879181 GTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCTTCGAGCTG 1879240 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || ||||||||||| ||||| |||||||||||||| ||| || Sbjct 1879241 CTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGAATCTT 1879300 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| ||||||||| | ||| | ||| || || || Sbjct 1879301 GGCCTTGACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTCTTACCCGT 1879360 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 1879361 GAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 118 bits (130), Expect = 9e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || || || ||||||||||||||| || || || ||||||||||| Sbjct 1879459 GTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTG 1879518 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| | |||||||||||||| || ||||| ||||| |||||||| || || Sbjct 1879519 CTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTT 1879578 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | |||||| | |||||||||| || | || ||||| || Sbjct 1879579 GGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGT 1879638 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 ||| || || ||||| ||||||||| Sbjct 1879639 CAGGGTCTTGACAAAGATCTGCATG 1879663 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||| | || ||| |||||||| || || || ||| | Sbjct 1878683 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAA 1878742 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| ||||||||||| ||||| || ||||| ||||||||| || ||| || || | Sbjct 1878743 GATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTT 1878802 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | ||| ||||||| ||| | ||| |||||||| || || || || Sbjct 1878803 GTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGAC 1878862 Query 118727 AAAAATCTGCATG 118739 ||| || |||||| Sbjct 1878863 AAAGATTTGCATG 1878875 Score = 109 bits (120), Expect = 5e-19 Identities = 143/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || ||||||||||| || | |||||| ||||| ||||| || ||| Sbjct 1878961 GTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCA 1879020 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || || |||||||| || || || ||||||||||||||| || || || Sbjct 1879021 GCAAA-ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTG 1879079 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||| |||| ||||||||||| || | ||| ||||||||||| || Sbjct 1879080 ACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTC 1879139 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 1879140 TTCACGAAGATTTGCAT 1879156 >seq98 Length=2497588 Score = 118 bits (130), Expect = 9e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || ||||||||||| || ||||| ||||||||||| Sbjct 2388459 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCGAGCTG 2388400 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||| | ||||| ||||| || || |||||||||||||| ||| || Sbjct 2388399 CTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGAATCTT 2388340 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||| | ||||||||| | || | || |||||||| Sbjct 2388339 CGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTGCCGGT 2388280 Query 118715 CAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || ||||| ||||||||| || Sbjct 2388279 AAGGGTCTTGACAAAGATCTGCATGCCT 2388252 Score = 109 bits (120), Expect = 5e-19 Identities = 151/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | |||||||| || || ||||| || ||| | |||||| |||||| Sbjct 2387956 ACCAAGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTC 2387897 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| ||||||| || || || || || || ||||| ||||||||| Sbjct 2387896 GAGCTGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTG 2387837 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | |||||||| |||||| || | ||| | ||| || Sbjct 2387836 GATCTTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTT 2387777 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || || || |||||||| Sbjct 2387776 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 2387747 Score = 100 bits (110), Expect = 2e-16 Identities = 145/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA--TCCTCGAGCTGTTTTC 118599 || ||||| || || |||||||| ||| |||| | |||| ||||| | ||| || | Sbjct 2388224 GTGGACTCCTTCTGGATGTTGTAGTCGG--ATAGGGTGCGTCCGTCCTCCAACTGCTTGC 2388167 Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659 ||||| ||||||| || || ||||| || || ||||||||||| || || || | Sbjct 2388166 CAGCGAAGATGAGGCGTTGTTGATCTGGCGGGATGCCCTCCTTATCCTGGATCTTCGCCT 2388107 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719 | || | || | || |||| ||||||||| | ||| | || |||||||| || | Sbjct 2388106 TCACGTTGTCAATCGTATCCGACGACTCGACCTCCAAGGTGATGGTCTTGCCGGTAAGTG 2388047 Query 118720 TTTTTACAAAAATCTGCATGGCT 118742 | || ||||| ||||||||| || Sbjct 2388046 TCTTGACAAAGATCTGCATGCCT 2388024 >seq79 Length=745021 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || |||||||| ||||||| ||||| ||||||| Sbjct 401245 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 401304 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||||| || || ||| |||| || || || || || || || |||| Sbjct 401305 AGCTGCTTGCCGGCGAAGATCAGTCGTTGTTGGTCTGGGGGGATGC 401350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829480008408