Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq120 134 9e-27 seq98 127 1e-24 >seq120 Length=2004100 Score = 134 bits (148), Expect = 9e-27 Identities = 157/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 34180 CACC-AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGT 34238 |||| ||||| | ||| ||| ||||| |||||||| ||||||| | |||| |||| | Sbjct 1879452 CACCGAGGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCT 1879511 Query 34239 CCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGG 34298 | | ||||||||| || |||||||| ||||||||||| || | || |||||||| Sbjct 1879512 CGAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCT 1879571 Query 34299 CTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTT 34358 ||||| ||| | || | || | |||| |||||||| || | ||||||||| | Sbjct 1879572 GGATCTTGGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCT 1879631 Query 34359 TGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || || || |||||||||||||| Sbjct 1879632 TGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1879662 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | || || || ||||| |||||||||||||| || ||| |||| Sbjct 1878663 AGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCC 1878722 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||||| ||||| || || |||||||||||| || | || |||||||| Sbjct 1878723 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCT 1878782 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | | | | |||| |||| || || || || | || || || Sbjct 1878783 TGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTC 1878842 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || |||||||| ||||| Sbjct 1878843 TTGCCGGTGAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 107 bits (118), Expect = 1e-18 Identities = 139/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || || |||| |||| |||||| || || ||| Sbjct 1878967 TCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGC-AAA 1879025 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| ||| | || ||||||||| ||||| ||| | | | Sbjct 1879026 ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTG 1879085 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || ||||| || | |||||| || |||||||| || || ||||| Sbjct 1879086 TCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTCACG 1879145 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 1879146 AAGATTTGCAT 1879156 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| ||||| || ||| | || || | ||||||||| || || Sbjct 1879752 TCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAG 1879811 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| || | || ||||||||| ||||| ||| | | | Sbjct 1879812 ATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 1879871 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || ||||| || | |||||||| ||||| |||||||| ||||| Sbjct 1879872 TCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAGTCTTCACG 1879931 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 1879932 AATATCTGCAT 1879942 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| || ||||| || || ||| ||| | || Sbjct 1879173 AGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCT 1879232 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || || |||||||| || || | || ||||||||| Sbjct 1879233 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 1879292 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | ||| ||||| || | ||||| || Sbjct 1879293 TGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTC 1879352 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| || || || ||||||||||| Sbjct 1879353 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 >seq98 Length=2497588 Score = 127 bits (140), Expect = 1e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || || |||| |||||||||||||| ||||| Sbjct 2388218 TCCTTCTGGATGTTGTAGTCGGATAGGGTGCGTCCGTCCTCCAACTGCTTGCCAGCGAAG 2388159 Query 34259 ATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| || || || || | |||| | || |||||| || ||||| ||| | | Sbjct 2388158 ATGAGGCGTTGTTGATCTGGCGGG-ATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTT 2388100 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | |||| ||| | ||| ||||| |||| |||||||| |||||||| || || || || Sbjct 2388099 GTCAATCGTATCCGACGACTCGACCTCCAAGGTGATGGTCTTGCCGGTAAGTGTCTTGAC 2388040 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 2388039 AAAGATCTGCAT 2388028 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || ||||| | || || ||||| |||||||| || ||| Sbjct 2388482 CCGCCGCGGAGGCGGAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGAC 2388423 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| ||||| || | ||||| || || || Sbjct 2388422 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGG 2388363 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | |||| ||| ||||| Sbjct 2388362 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACC 2388303 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| ||||| |||||||| || || || |||||||||||||| Sbjct 2388302 TCCAGCGTAATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 2388256 Score = 96.9 bits (106), Expect = 2e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | |||| || ||||| ||||| |||||||| || ||| | || || | | Sbjct 2387952 AGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGC 2387893 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| ||||| ||||| || || ||||| ||| | || |||||||| ||| Sbjct 2387892 TGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATC 2387833 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||| | | | | || | || | || ||||| || | ||||| || ||||| Sbjct 2387832 TTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCC 2387773 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || ||||||||||| Sbjct 2387772 GTGAGGGTCTTGACGAAGATCTGCAT 2387747 Score = 84.2 bits (92), Expect = 1e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 |||||| || || | ||| || ||||| | || |||||||| |||||||||||||| Sbjct 2387746 TCCGCCACGAAGACGCAGAACGAGGTGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGA 2387687 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275 |||| ||| |||| || | |||||| || || || ||||| |||||||| || Sbjct 2387686 CAGCGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGATC 2387633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071314885440