Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq35 140 7e-28 seq1 109 1e-18 >seq35 Length=923662 Score = 140 bits (154), Expect = 7e-28 Identities = 241/349 (69%), Gaps = 1/349 (0%) Strand=Plus/Minus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||| | ||||||||| || || |||||||| || || || ||||| | | ||| Sbjct 867250 CTTCGGTTTCAAAACCCTTGAACGCTCGTATCTGCTGAAGATCAATGGCCGAGTTGCGGA 867191 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945 || |||||| || | ||||| || |||||||| |||||| || |||||| || | Sbjct 867190 GCGGCCACAGCACCTGCTTATGCGTGTTGCTGTCGGTATTCACGGGGCTGACATCGACCG 867131 Query 248946 CGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCT 249005 | | ||||||| |||| | ||| || || | | |||||||| | || ||||| Sbjct 867130 TGCGATCGAGACCTACAACCTCATGTCCGAGCGATTCTTCACACATGCTTCGCCAACGCT 867071 Query 249006 CTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGA 249065 ||||||||| ||||| |||| ||||| ||||| ||||| || | |||| | || Sbjct 867070 CTTCAACGCGGGTACACCCAACCCGCAGCTCAGCTCATGCTTCCTGGTCTGCATGAAGGA 867011 Query 249066 CGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGC 249125 ||| || |||| |||||||| || || || || | |||| |||| ||| ||| Sbjct 867010 CGATTCGATCGAGGGCATTTACGATACCCTGAAGAACTGCGCGATGATTAGTAAGACCGC 866951 Query 249126 GGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGA-AGGGTTCGTA 249173 || || ||||||||| | || ||| || || || | ||||| |||| Sbjct 866950 TGGTGGTATCGGTCTCAGCATCCACAATATTCGCGCCACAGGGTGCGTA 866902 >seq1 Length=2640167 Score = 109 bits (120), Expect = 1e-18 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || || | |||| ||| |||| ||| | ||||| || ||||||||||| |||||||| Sbjct 596166 ACACCAGCCTTGGAGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGC 596225 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGG-CGCAGTTGTACACCTTGTCGTACCCCAG 157362 || ||||||||||| | || || ||||||| ||| |||||| ||||| |||| || || Sbjct 596226 GAGATCATGTCCATGAAGTCAAAGGGGTTGGTCGC-GTTGTAGACCTTCTCGTCACCGAG 596284 Query 157363 CTGGTTCAGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGAT 157422 | | ||| ||| || || |||| |||||| | |||| |||| | | || Sbjct 596285 CGCGACGAGCAGACGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTCGAGTTCAT 596344 Query 157423 ACCGATGAGCGCGACGGGAAGCGC 157446 || |||||||||||||| || || Sbjct 596345 GCCAATGAGCGCGACGGGCAGAGC 596368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764006172032