Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq120 131 1e-25 seq98 109 4e-19 >seq120 Length=2004100 Score = 131 bits (144), Expect = 1e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||| |||||||||||| || || |||| || ||||| Sbjct 1878671 GTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTG 1878730 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| |||||||| || | || |||||||| || || Sbjct 1878731 CTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTT 1878790 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | |||| | ||| ||||| | ||||||||||||||| || Sbjct 1878791 TGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGGT 1878850 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| ||||||||||||||| Sbjct 1878851 GAGCGTCTTGACAAAGATTTGCATG 1878875 Score = 104 bits (114), Expect = 2e-17 Identities = 139/192 (72%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||||||||||||||| || |||| |||| ||||| || || || || || Sbjct 1878966 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCAAA 1879025 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| ||||| || || | ||||||||||| || || ||| || Sbjct 1879026 -ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 1879084 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | ||| | ||| ||||| | || ||||||||||| ||||| |||||||| Sbjct 1879085 GTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTCAC 1879144 Query 45325 AAAGATTTGCAT 45336 ||||||||||| Sbjct 1879145 GAAGATTTGCAT 1879156 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||| ||||| || || ||| | || || || || || |||||||| Sbjct 1879193 CTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 1879252 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| || || ||||| | |||||||||||| ||| || ||| || Sbjct 1879253 GATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 1879312 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | ||||| ||| ||||| | ||| |||||||| ||||| || ||||| || Sbjct 1879313 GTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGAC 1879372 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 1879373 GAAGATCTGCAT 1879384 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||||||||||| ||| || || |||| || || || Sbjct 1879459 GTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTG 1879518 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || || | ||||| ||||| ||||| | || ||||||||| || || Sbjct 1879519 CTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTT 1879578 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | || ||||| | || || ||||||||||| Sbjct 1879579 GGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGT 1879638 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||| ||||| |||||||| |||||| Sbjct 1879639 CAGGGTCTTGACAAAGATCTGCATG 1879663 >seq98 Length=2497588 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||| || ||| |||| |||| || || || Sbjct 2388459 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCGAGCTG 2388400 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| ||||| |||||||| || || || | |||||||||||| ||| || Sbjct 2388399 CTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGAATCTT 2388340 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| ||| ||||||| ||||| |||||||| || Sbjct 2388339 CGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTGCCGGT 2388280 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||| |||||| Sbjct 2388279 AAGGGTCTTGACAAAGATCTGCATG 2388255 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 45126 ATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 |||||||| || || || ||||||||| ||||| |||||| || ||| | || Sbjct 2387958 ATACCAAGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCC 2387899 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || || ||||| || | || |||||||| || || | || |||||||| Sbjct 2387898 TCGAGCTGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 2387839 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | | ||||| ||| || || | ||| |||||| Sbjct 2387838 TGGATCTTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTC 2387779 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| || ||||| || ||||| ||||| Sbjct 2387778 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 2387747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074362193654