Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 140 4e-28 >seq1 Length=2640167 Score = 140 bits (154), Expect = 4e-28 Identities = 367/557 (66%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| | ||||||||||| || || | || || || || ||||| Sbjct 599363 CACGCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTGAGG 599304 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| || || ||||| || ||||| ||||| |||||||| ||| || ||||| Sbjct 599303 CCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCAAAACTTCCCGAGAAGAAT 599244 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCAC-TGTCATGT 36334 |||||||| || || ||||| || | ||| || || || || | | | |||| Sbjct 599243 ATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAATGATGATCGCTTGTCTGAG 599184 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 ||||| | ||||| ||||||||||| || | || || || |||||||| || | Sbjct 599183 ATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCTATCGCGTCG 599124 Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454 || ||| | | || | | || || | || || ||||| | || ||| | Sbjct 599123 AACAGAAACTCGCGCTCTTGAGGGTCCTTGATGTAGGTGTCAATTAGGAGGGAATATGTC 599064 Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514 |||||||| ||||| || || || || || |||||||| || | ||| || | | | Sbjct 599063 TCCGAATGTATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGAGCTTCTGCAGCC 599004 Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574 ||||| || | | || ||||| | | || || || || || ||||| || || Sbjct 599003 TGTACCTCGTTTGAGAAGCGTTCAACGAGGTTCTCGTTTACAATGCCGTCGGACGCGGCG 598944 Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTT---ATTCCAA 36631 || || || | || || || ||| |||| | || ||||| ||||| Sbjct 598943 AAGAATGCAAGGACGTGGGAGATGAAACGGCGCTCGTCCTGGGTGAGTTTGTCGTTCCAG 598884 Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691 || ||| || | | |||| ||||| ||||||| || || |||||||| ||| Sbjct 598883 TCCATGAGGTCATGCCCCAGGTCCAGCTCTTCTGCTGTCCAGAACGAGGCCTCTGCTTTT 598824 Query 36692 TTATACATATTCCAGAT 36708 || ||||| | |||||| Sbjct 598823 TTGTACATCTGCCAGAT 598807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171368474160