Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=2640167 Score = 107 bits (118), Expect = 2e-18 Identities = 247/370 (67%), Gaps = 4/370 (1%) Strand=Plus/Minus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 |||||||| || || | |||||| ||||| || || || || || || || || | Sbjct 599363 CACGCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTGAGG 599304 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779 || ||||| | || || || || | ||| ||||||| || || ||| || |||||| Sbjct 599303 CCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCAAAACTTCCCGAGAAGAAT 599244 Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839 ||||| || || ||||||||||| | || | ||| || || |||| | |||| ||| Sbjct 599243 ATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAATGATGATCGCTTGTCTGAG 599184 Query 13840 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTG 13899 ||||| ||||| || | || || || || | || || || || || | | Sbjct 599183 ATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCTATCGCGTCG 599124 Query 13900 AATAAATGTTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 13957 || | | || ||||| | || |||| ||||| || ||||| || | | ||| Sbjct 599123 AACAGAAACTCGCGCTCTTGAGGGTCCTTG--ATGTAGGTGTCAATTAGGAGGGAATATG 599066 Query 13958 TTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14017 | || || |||||||| || || |||||| || || || || || | |||||||| Sbjct 599065 TCTCCGAATGTATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGAGCTTCTGCAG 599006 Query 14018 ATTGTACCTC 14027 |||||||| Sbjct 599005 CCTGTACCTC 598996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587759069360