Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq120 95.1 1e-14 seq98 84.2 2e-11 >seq120 Length=2004100 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||||||||||| || |||||||| || | | ||| ||||||| || ||| Sbjct 1878672 TGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTGC 1878731 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | ||||||||| || ||| | | ||||||||| || || Sbjct 1878732 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTT 1878791 Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 ||||| | | || || || |||| |||||| ||||| || || || || |||| Sbjct 1878792 GCCTTGACGTTGTCG--ATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGG 1878849 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || ||||| || ||||| Sbjct 1878850 TGAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| | ||| || ||||||| |||||||| || | || Sbjct 1879472 TCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAA 1879531 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| ||| || | | |||||||||| || || ||| | | Sbjct 1879532 ATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTA 1879591 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| |||| ||| || ||||| || ||||| || || || || || || ||| Sbjct 1879592 TCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTCTTGACA 1879651 Query 48716 AAAATCTGCAT 48726 || |||||||| Sbjct 1879652 AAGATCTGCAT 1879662 >seq98 Length=2497588 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || ||||||||||| | || || ||||||| |||||||| || || | Sbjct 2388447 CTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 2388388 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 || || ||||| ||||| || | | ||||||||| ||| ||| ||||| | Sbjct 2388387 GATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 2388328 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || || || |||| ||||| ||| | || ||||| || ||||| || || || Sbjct 2388327 GTCG--ATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTGCCGGTAAGGGTCTTG 2388270 Query 48713 ACAAAAATCTGCAT 48726 ||||| |||||||| Sbjct 2388269 ACAAAGATCTGCAT 2388256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250306684174