Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq87 91.5 8e-14 seq131 89.7 3e-13 seq119 86.0 3e-12 seq159 84.2 1e-11 seq109 84.2 1e-11 seq97 84.2 1e-11 >seq87 Length=2533944 Score = 91.5 bits (100), Expect = 8e-14 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||| ||| |||||||||| ||||||| ||||||||||||| ||||||| |||||| Sbjct 812012 TGGCCAATGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAAC 811953 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 811952 TGAGCTAATCGGCC 811939 Score = 84.2 bits (92), Expect = 1e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| | | |||||||||| ||||||| ||||||||||||| ||||||| || Sbjct 2102637 AAAGTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAAC 2102578 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||| | |||| Sbjct 2102577 CAACTGAGCTAGTCGGCC 2102560 >seq131 Length=1833636 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| ||| || ||||||| ||||||| ||||||||||||| ||||||| || Sbjct 1005284 AAAGTGGCCAATGCCGGGGTCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAAC 1005343 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 1005344 CAACTGAGCTAATCGGCC 1005361 >seq119 Length=122805 Score = 86.0 bits (94), Expect = 3e-12 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| | || Sbjct 27273 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGTCGG 27214 Query 11528 CCGT 11531 |||| Sbjct 27213 CCGT 27210 >seq159 Length=43342 Score = 84.2 bits (92), Expect = 1e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| | | |||||||||| ||||||| ||||||||||||| ||||||| || Sbjct 40257 AAAGTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAAC 40198 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||| | |||| Sbjct 40197 CAACTGAGCTAGTCGGCC 40180 >seq109 Length=2399336 Score = 84.2 bits (92), Expect = 1e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| | | |||||||||| ||||||| ||||||||||||| ||||||| || Sbjct 568375 AAAGTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAAC 568434 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||| | |||| Sbjct 568435 CAACTGAGCTAGTCGGCC 568452 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| | || Sbjct 497373 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGTCGG 497314 Query 11528 CC 11529 || Sbjct 497313 CC 497312 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| | || Sbjct 582386 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGTCGG 582327 Query 11528 CC 11529 || Sbjct 582326 CC 582325 >seq97 Length=355314 Score = 84.2 bits (92), Expect = 1e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| | | |||||||||| ||||||| ||||||||||||| ||||||| || Sbjct 342088 AAAGTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAAC 342147 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||| | |||| Sbjct 342148 CAACTGAGCTAGTCGGCC 342165 Lambda K H 0.640 0.410 0.922 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261490645475224