Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq120 125 6e-24 seq98 100 3e-16 >seq120 Length=2004100 Score = 125 bits (138), Expect = 6e-24 Identities = 157/214 (73%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 94798 CACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCT 94856 ||||||| || | || || ||||| || | ||| |||||| | ||| | ||||| Sbjct 1879732 CACCAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCT 1879791 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || ||| ||||||| | | ||||| ||||| ||||| || || ||||| | Sbjct 1879792 CAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCT 1879851 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || ||||||||| | ||| |||||||| | ||||| || | |||||||| | Sbjct 1879852 GGATCTTGGCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCT 1879911 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 | || || ||||| ||||| || ||||||||||| Sbjct 1879912 TGCCCGTGAGAGTCTTCACGAATATCTGCATGCT 1879945 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| ||||| || | || ||||| | ||| | ||| || ||||| || ||| Sbjct 1879188 GTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCTTCGAGCTGCTTGCCG 1879247 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | ||||||||||||||||| || || ||||| | ||| || |||||| Sbjct 1879248 GCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1879307 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| ||||| | ||||| |||| ||||| || || || || || || Sbjct 1879308 ACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTCTTACCCGTGAGGGTC 1879367 Query 94991 TTCACAAAGATCTGCAT 95007 || || ||||||||||| Sbjct 1879368 TTGACGAAGATCTGCAT 1879384 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| |||||||| || | ||| |||||| || || | ||||| ||||| Sbjct 1879459 GTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTG 1879518 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || |||| || | | ||||| || |||||||| ||||| ||||| | || || Sbjct 1879519 CTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTT 1879578 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||||| || | | ||||| | ||||| || | ||||||||| || || || Sbjct 1879579 GGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGT 1879638 Query 94984 AAGAGTTTTCACAAAGATCTGCATGC 95009 || || || |||||||||||||||| Sbjct 1879639 CAGGGTCTTGACAAAGATCTGCATGC 1879664 >seq98 Length=2497588 Score = 100 bits (110), Expect = 3e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 94799 ACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| || | |||||| ||||| || | |||||| ||| | |||| | |||||| Sbjct 2387956 ACCAAGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTC 2387897 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| | | ||| || ||||| ||||| ||||| ||||| | Sbjct 2387896 GAGCTGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTG 2387837 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | | | ||||| | ||||| |||| ||||| || || Sbjct 2387836 GATCTTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTT 2387777 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 2387776 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 2387747 Score = 98.7 bits (108), Expect = 9e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || | ||||| || | || ||||| || || || || || ||| Sbjct 2388410 TCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTG 2388351 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||||||| | ||| |||||| | ||||| || | ||| ||| Sbjct 2388350 TCCTGAATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATG 2388291 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || ||||| || || |||||||||||||||| Sbjct 2388290 GTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCATGC 2388254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290224966640