Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq142 125 1e-24 seq98 107 3e-19 >seq142 Length=1567573 Score = 125 bits (138), Expect = 1e-24 Identities = 121/153 (79%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| || || Sbjct 508339 GCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAGGGTATCACAAAGCCCGCCAT 508397 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || || ||||||||||| || ||||||||| |||| || | ||||||| |||| Sbjct 508398 TCGCCGCCTCGCTCGTCGTGGGGGTGTCAAGCGTATCTCCGGTCTCATCTATGAGGAGAC 508457 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 |||| |||| | || ||||||||| ||| ||| Sbjct 508458 CCGTGGTGTTCTCAAAATCTTCCTCGAGAACGT 508490 Score = 98.7 bits (108), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| || ||||||||||| || || ||||| || ||||||||| |||| Sbjct 458470 AGGCATCACCAAGCCTGCCATCCGTCGTCTTGCCCGCCGTGGCGGTGTCAAGCGTATCTC 458411 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 || | |||| || |||| |||| ||| | |||||||||||| ||| ||| Sbjct 458410 CGGTCTCATCTACGAGGAGACCCGTGGTGTCCTCAAGATCTTCCTCGAGAACGT 458357 >seq98 Length=2497588 Score = 107 bits (118), Expect = 3e-19 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 |||||||||||||| |||||||||||||| ||||||||| |||| || | |||| || Sbjct 733760 GCTATCCGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGGCCTCATCTACGAG 733701 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| |||| ||| | ||||||||| | ||| ||| |||| ||| || || ||| Sbjct 733700 GAGACCCGTGGTGTCCTCAAGATCTTCTTGGAGAACGTCATCCGTGACTCTGTCACCTAC 733641 Query 16607 ACCGAGCACGCTAA 16620 || |||||||| || Sbjct 733640 ACTGAGCACGCGAA 733627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075040910582