Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq35 113 1e-19 >seq35 Length=923662 Score = 113 bits (124), Expect = 1e-19 Identities = 147/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || |||||||| |||| ||| || |||| |||| || ||||| || ||||| ||| Sbjct 866424 GCGCAGAAGCTTTGGTATGCTATTCTGGAGGCGCAAATCGAGACTGGTGGACCCTTCATG 866365 Query 364171 TTGTACAAAGATTCGTGCAACCGC-AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCA 364229 | ||||| ||||| ||| | || ||||| ||||||||| |||| || || || || Sbjct 866364 CTCTACAAGGATTC-TGCCAATGCGAAGTCTAACCAGCAGAACCTCGGCACCATCAAGTC 866306 Query 364230 GAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289 | ||||| || || ||||| || || ||| | | ||||| ||||| || || || || Sbjct 866305 GTCAAACCTGTGCACGGAGATCATCGAGTACTCTTCACCCGAGGAGACCGCTGTTTGCAA 866246 Query 364290 CCTTGCGTCGATCGCGCTTCC 364310 ||||||||| ||||| || || Sbjct 866245 CCTTGCGTCTATCGCTCTCCC 866225 Score = 87.8 bits (96), Expect = 5e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 363735 TTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 |||||| |||||| || || |||||||| | |||||||||||||| | | || Sbjct 866852 TTACATCGCCGGCACGAACGGCTATTCGAATGGCATTGTTCCCATGCTTCGCGCTTACGA 866793 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | || || | || |||||||||||||| ||||| || || || || || || Sbjct 866792 CGCAACGGCTCGCTATGTCGACCAGGGTGGCAATAAGCGTCCGGGTGCTTTCGCCATCTA 866733 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 |||||||| || |||||||| || || || | || ||||| || || || || Sbjct 866732 CCTCGAGCCCTGGCACGCCGATATCTTCGACTTCATCGACCTCCGTAAGAATCATGGTAA 866673 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||||| | ||||| || || || ||||| || || ||| || Sbjct 866672 GGAGGAGGTTCGTGCCCGCGACCTCTTCTACGCGCTGTGGATT 866630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350694336068