Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq120 129 6e-25 seq98 129 6e-25 seq46 98.7 9e-16 seq79 86.0 6e-12 seq1 82.4 7e-11 >seq120 Length=2004100 Score = 129 bits (142), Expect = 6e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || |||||||||||| | |||||| ||||| ||||||||||| Sbjct 1879745 GGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCC 1879804 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || |||| | |||||||||||| || || || || || ||||| ||| || ||| Sbjct 1879805 GGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 1879864 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | ||| || | |||||||| |||| ||| | ||| || || || ||||| Sbjct 1879865 GACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAGT 1879924 Query 131217 TTTTACGAAAATCTGCATG 131235 || ||||| ||||||||| Sbjct 1879925 CTTCACGAATATCTGCATG 1879943 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | || |||||| || |||||||| ||| Sbjct 1878648 CCACCACGGAGACGAAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1878707 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| |||||| || |||||||| ||| |||| | |||||||||||| || ||| Sbjct 1878708 AGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 1878767 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 1878768 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACC 1878827 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||||| || || ||||| || || || || || || |||||| Sbjct 1878828 TCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGACAAAGATTTGCATG 1878875 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| ||||||||||||||| || || || |||||| ||||||||||| Sbjct 1879466 GTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTGCTTGCCA 1879525 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || | || | |||||||||||||||||| || ||||| ||||| ||| || ||| Sbjct 1879526 GCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 1879585 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| || |||| |||| || | ||| || || || || || Sbjct 1879586 ACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTC 1879645 Query 131218 TTTACGAAAATCTGCATG 131235 || || || ||||||||| Sbjct 1879646 TTGACAAAGATCTGCATG 1879663 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| |||||||| ||||| |||||||| Sbjct 1879158 CCACCACGGAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAA 1879217 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| ||| |||| | |||||||| || ||||| Sbjct 1879218 AGCGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGA 1879277 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||||| Sbjct 1879278 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGACC 1879337 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || ||||| || || || || ||||| |||||||| Sbjct 1879338 TCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| ||||||||||| || | ||||| |||||| |||||||| || Sbjct 1878960 GGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACC 1879019 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || | || | ||||||||||| || || || || || ||||| ||| ||| ||| Sbjct 1879020 AGCAAA-ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTT 1879078 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | ||||| | ||||||| |||| || | || || ||||| || || Sbjct 1879079 GACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGT 1879138 Query 131217 TTTTACGAAAATCTGCAT 131234 || ||||| || ||||| Sbjct 1879139 CTTCACGAAGATTTGCAT 1879156 >seq98 Length=2497588 Score = 129 bits (142), Expect = 6e-25 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || ||||||||||| || |||||| |||||| ||||||||||| Sbjct 2388452 GTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCA 2388393 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || ||||| || || || ||||| || || ||||| || ||| |||| Sbjct 2388392 GCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTG 2388333 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||| |||| ||||||| || | |||| ||| || ||||| || || Sbjct 2388332 ACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTGCCGGTAAGGGTC 2388273 Query 131218 TTTACGAAAATCTGCATGACT 131238 || || || ||||||||| || Sbjct 2388272 TTGACAAAGATCTGCATGCCT 2388252 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | ||| | || |||||||| || ||||| || || Sbjct 2388710 CCACCACGGAGGCGAAGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAA 2388651 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| || ||||| || || |||| || ||||||||||| || || Sbjct 2388650 AGGGTACGCCCATCCTCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGA 2388591 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | ||||| | ||||| | Sbjct 2388590 ATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACC 2388531 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | || || |||||||| ||||| Sbjct 2388530 TCCAGAGTGATGGTCTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || ||||| || ||| | ||||| ||||| ||||||||||| Sbjct 2387943 GTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCC 2387884 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | || || ||||| || || || ||||| ||||| ||| ||| ||| Sbjct 2387883 GCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTCGCCTTC 2387824 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||||| || | ||| | || || || || || || Sbjct 2387823 ACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCCGTGAGGGTC 2387764 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 2387763 TTGACGAAGATCTGCAT 2387747 >seq46 Length=919979 Score = 98.7 bits (108), Expect = 9e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| | || | |||||||||||| ||||||||||| || Sbjct 474151 CCACCACGCAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAG 474092 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 474091 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 474032 Query 131128 AT 131129 || Sbjct 474031 AT 474030 >seq79 Length=745021 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || || || | ||| |||||||| || |||||||| ||||||| |||||| Sbjct 401239 CGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 401298 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||||| ||||||||||| ||| |||| | || || ||||| || ||||| Sbjct 401299 TCCTCGAGCTGCTTGCCGGCGAAGATCAGTCGTTGTTGGTCTGGGGGGAT 401348 >seq1 Length=2640167 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/182 (70%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 46408 GCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTT 46467 || ||||||| || || | ||||||||| | || |||||| | ||||||||||| Sbjct 596368 GCTCTGCCCGTCGCGCTCATTGGCATGAACTCGAAGCTCATGTGCCAATACATCGAGTTC 596309 Query 46468 GTAGCGGACCGACTGCTCGTGCAGCT---TCACCAGCCGAAGCATTTTCACGCGCGCAAT 46524 || || ||||| |||||||| ||| | || | |||| | ||||| ||| Sbjct 596308 GTCGCCGACCGTCTGCTCGTCGCGCTCGGTGACGA---GAAGGTCTACAACGCGACCAAC 596252 Query 46525 CCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGC 46584 || ||||| || ||| ||| ||||| || ||||||| || || || ||||| ||||| Sbjct 596251 CCCTTTGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGG 596192 Query 46585 GT 46586 || Sbjct 596191 GT 596190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011773372160