Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq98 104 2e-17 seq120 82.4 6e-11 >seq98 Length=2497588 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | ||| |||||||||||||| || ||||||||||||| Sbjct 2388254 CCTCCGCGGAGACGAAGAACGAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAT 2388195 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||||||||| || ||||| || | || || || ||||| || || Sbjct 2388194 AGGGTGCGTCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCTGGCGGG 2388135 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| || || || | | |||||| | | | | || || | ||| Sbjct 2388134 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTTGTCAATCGTATCCGACGACTCGACC 2388075 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || ||||| || || |||||||| |||||||| Sbjct 2388074 TCCAAGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 2388028 >seq120 Length=2004100 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||| |||| | ||| | | ||||| | || Sbjct 1879740 TGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGC 1879799 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || || ||||| ||||| || | |||||| ||||| || || Sbjct 1879800 TTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTG 1879859 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | |||||| || ||| || | ||||||||| || || | Sbjct 1879860 GC--CTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCG 1879917 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTGTAGC 16943 | || || || || || |||||||| ||| || Sbjct 1879918 TGAGAGTCTTCACGAATATCTGCATGCTGTCGC 1879950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087140960260