Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 >seq1 Length=2640167 Score = 154 bits (170), Expect = 2e-32 Identities = 370/557 (66%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| | ||||||||||| || || | || || || || ||||| Sbjct 599363 CACGCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTGAGG 599304 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| || || ||||| || ||||| ||||| |||||||| ||| || ||||| Sbjct 599303 CCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCAAAACTTCCCGAGAAGAAT 599244 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGC-TGTCATGT 32837 |||||||| || || ||||| || | ||| || || || || | ||| |||| Sbjct 599243 ATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAATGATGATCGCTTGTCTGAG 599184 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||||| | ||||| ||||||||||| || | || || || |||||||| || | Sbjct 599183 ATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCTATCGCGTCG 599124 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 || ||| | | || | | || || | || || ||||| | || ||| | Sbjct 599123 AACAGAAACTCGCGCTCTTGAGGGTCCTTGATGTAGGTGTCAATTAGGAGGGAATATGTC 599064 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 |||||||| ||||| || || || || || ||||||||||| | ||| || | | | Sbjct 599063 TCCGAATGTATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGAGCTTCTGCAGCC 599004 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 ||||| || | | || ||||| | | || || || || || ||||| || || Sbjct 599003 TGTACCTCGTTTGAGAAGCGTTCAACGAGGTTCTCGTTTACAATGCCGTCGGACGCGGCG 598944 Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTT---ATTCCAA 33134 || || || | || || || ||| ||||| | || ||||| ||||| Sbjct 598943 AAGAATGCAAGGACGTGGGAGATGAAACGGCGCTCGTCCTGGGTGAGTTTGTCGTTCCAG 598884 Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 || ||| || | | |||| ||||| ||||||| || || |||||||| ||| Sbjct 598883 TCCATGAGGTCATGCCCCAGGTCCAGCTCTTCTGCTGTCCAGAACGAGGCCTCTGCTTTT 598824 Query 33195 TTATACATATTCCAGAT 33211 || ||||| | |||||| Sbjct 598823 TTGTACATCTGCCAGAT 598807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630621850400