Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq120 118 9e-22 seq98 102 7e-17 >seq120 Length=2004100 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| ||||| || |||||| | || || || ||||||| |||| || ||||| ||| Sbjct 1879942 ATGCAGATATTCGTGAAGACTCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 1879883 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||| || || |||||||| ||||| Sbjct 1879882 GACACTATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCAGACCAG 1879823 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || |||| ||||| | ||||||||| Sbjct 1879822 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGATTACAAC 1879763 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 1879762 ATCCAGAAGGAGTCCACCCTCCA 1879740 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || ||||| | ||||| | || || |||||||| Sbjct 1879384 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTCGAGTCGTCG 1879325 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| | || || | ||| ||||| || || ||||| || || Sbjct 1879324 GACACAATCGACAACGTCA---AGGCCAAGATTCAG-GACAAGGAGGGCATTCCTCCAGA 1879269 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| | || || |||||||| || | ||||||| ||||| | ||||| Sbjct 1879268 TCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACGCTTTCGGATTA 1879209 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||||||||| || || || || || || Sbjct 1879208 CAATATTCAGAAGGAGTCTACCCTCCA 1879182 >seq98 Length=2497588 Score = 102 bits (112), Expect = 7e-17 Identities = 148/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || |||| || | || || |||||||| Sbjct 2388256 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTGGAGGTCGAGTCGTCC 2388315 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| | || || | ||| ||||| || || || |||||||| Sbjct 2388316 GACACTATCGACAACGTCA---AGGCGAAGATTCA-GGACAAGGAGGGCATCCCACCTGA 2388371 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||||| | || || || ||||| || | || || | |||||| || ||||| Sbjct 2388372 TCAACAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGATTA 2388431 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| || || || || || ||||| || Sbjct 2388432 CAACATCCAGAAGGAGTCGACGCTCCA 2388458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327081073810