Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 172 6e-38 >seq1 Length=2640167 Score = 172 bits (190), Expect = 6e-38 Identities = 382/566 (67%), Gaps = 19/566 (3%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTGCTGAATGTTA 93149 ||| || |||||||| || | || ||||| | || | || | ||| || ||| || | Sbjct 596519 GCAGGCGAAGTCGGTGTGCATGCCCTCGTCCC-TGCTGATGAGCTCGTTCGAGAAGGTGA 596577 Query 93150 AACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaa 93209 ||| || | ||||| || ||||||||||| || || || || || |||||| || | Sbjct 596578 GACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAGA 596637 Query 93210 aTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAA--TTACT 93267 | ||||| || ||||| || || || |||| || || || || |||| || || Sbjct 596638 AGATACCCTCGACGGCGGCGAACGCGACAAGGCGCTCAGCGAA------GGAAGATTTCT 596691 Query 93268 GCT----GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGA 93323 | |||||| | ||||||||||| || |||||||| || || | || |||| Sbjct 596692 TGTCAGAGATCCAGCGGAGGGCCCAATCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGA 596751 Query 93324 TAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAG 93383 | |||| || |||| || |||| | || ||| ||||| || || || | ||| | Sbjct 596752 TGGCGTCGAACAGGTGCTCGCGCTGCTTCGGGTCTTTGATGTACGTGTCAATGAGCAGGG 596811 Query 93384 AATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTT 93443 | ||| | || || |||| |||||||| || ||||| |||||||| || | || | Sbjct 596812 AGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCT 596871 Query 93444 CCGTGATCTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCG 93502 | | || |||||| || ||| ||| | ||| ||||| ||||| ||||| ||||| ||| Sbjct 596872 CAGCGACCTGCACCTCGTTGCTGAAA-CGCTCGACGAGGTTTTCGTTGACAATACCGTCG 596930 Query 93503 GATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGC 93559 || || || || || || | | |||| || || | | ||| | || || | | Sbjct 596931 GACGCGGCGAAGAAGGCGAGGACATGCGAGATGAAGTATCGCTCGTTGTCGTTGAGACGG 596990 Query 93560 TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619 || ||| ||| ||||| || || || || | || || | ||||| ||||| || Sbjct 596991 TTGGTCCAGTCGTGAAGATCCTTGGAGAGGTCCATCTCCTCAGCGGTCCAGAACGAGGCC 597050 Query 93620 TCTGCTTTTTTGTACATATCCCATAT 93645 || || || |||||||| | ||| || Sbjct 597051 TCGGCCTTCTTGTACATTTGCCAAAT 597076 Score = 156 bits (172), Expect = 5e-33 Identities = 374/560 (67%), Gaps = 7/560 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTGCTGAATGTTA 93149 ||||||||||||||| || | || ||||||| || | || | |||||| ||| || | Sbjct 599364 GCACGCAAAGTCGGTGTGCATGCCCTCGTCTC-TGCTGATGAGCTCATTCGAGAAGGTGA 599306 Query 93150 AACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaa 93209 || || | || || || ||||||||||| |||||||| |||||||| || || || | Sbjct 599305 GGCCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCAAAACTTCCCGAGAAGA 599246 Query 93210 aTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-CGGAATTACTG 93268 |||| ||||| || || ||||| || |||| | |||| | || || | | ||| Sbjct 599245 ATATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAATGATGATCGCTTGTCTG 599186 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 |||||| | ||||| ||||| || ||||| || || || | || || || ||| Sbjct 599185 -AGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCTATCGCG 599127 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 | || || | || ||||| | | || ||||| || || |||| || ||||| Sbjct 599126 TCGAACAGAAACTCGCGCTCTTGAGGGTCCTTGATGTAGGTGTCAATTAGGAGGGAATAT 599067 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | || ||||| | |||||||| || ||||| |||||||| || | |||||| | Sbjct 599066 GTCTCCGAATGTATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGAGCTTCTGCA 599007 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 ||| || || | || || | || ||||| || || || || || || ||||| || Sbjct 599006 GCCTGTACCTCGTTTGAGAAGCGTTCAACGAGGTTCTCGTTTACAATGCCGTCGGACGCG 598947 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATC---C 93565 || || || || | | || || ||| | ||| || | | || || || | Sbjct 598946 GCGAAGAATGCAAGGACGTGGGAGATGAAACGGCGCTCGTCCTGGGTGAGTTTGTCGTTC 598887 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || || || || | || || | ||||| | ||||| ||||| || |||||| Sbjct 598886 CAGTCCATGAGGTCATGCCCCAGGTCCAGCTCTTCTGCTGTCCAGAACGAGGCCTCTGCT 598827 Query 93626 TTTTTGTACATATCCCATAT 93645 ||||||||||| | ||| || Sbjct 598826 TTTTTGTACATCTGCCAGAT 598807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859588827760