Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq120 127 2e-24 seq98 104 2e-17 >seq120 Length=2004100 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||| || || || || || | Sbjct 1879942 ATGCAGATATTCGTGAAGACTCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 1879883 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || || ||||||||||| |||||||| || || Sbjct 1879882 GACACTATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCAGACCAG 1879823 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | |||||| ||||||| |||||||||||||| Sbjct 1879822 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGATTACAAC 1879763 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 1879762 ATCCAGAAGGAGTCCACC 1879745 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || ||| | || Sbjct 1879662 ATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACCATCACGCTCGAGGTCGAATCTTCC 1879603 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || || |||||||| || ||||| || || || Sbjct 1879602 GACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAG 1879543 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | ||||| ||| || | |||||||||||| Sbjct 1879542 CAGCGTCTCATTTTTGCTGGCAAGCAGCTCGAGGACGGCCGTACGTTGTCCGATTACAAC 1879483 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || |||||||| Sbjct 1879482 ATTCAGAAGGAATCCAC 1879466 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| ||| |||| ||||| || || | | Sbjct 1879384 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTCGAGTCGTCG 1879325 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||| ||||| || ||||| Sbjct 1879324 GACACAATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGATCAG 1879265 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | || ||| |||||| | || |||||||| Sbjct 1879264 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACGCTTTCGGATTACAAT 1879205 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || || ||| Sbjct 1879204 ATTCAGAAGGAGTCTACC 1879187 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | ||||| || ||| | || || || || || | || Sbjct 1878874 ATGCAAATCTTTGTCAAGACGCTCACCGGCAAGACGATTACCCTCGAGGTTGAGTCTTCC 1878815 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| ||| || ||||||||||| || || || ||||| || Sbjct 1878814 GACACGATCGACAACGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAG 1878755 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| || | ||||| || ||| ||||||| |||||| Sbjct 1878754 CAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGGCGTACCCTCTCCGACTACAAC 1878695 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 1878694 ATCCAGAAGGA 1878684 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| || ||| |||| || || || || | | Sbjct 1879156 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCTTCG 1879097 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || |||||||||||||| ||||| || || || Sbjct 1879096 GATACCATTGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAG 1879037 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | ||||| ||||| | || || |||||| Sbjct 1879036 CAGCGCCTGAT-TTTGCTGGTAAGCAGCTGGAGGACGGTCGCACTCTTTCGGACTACAAC 1878978 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || || ||| Sbjct 1878977 ATTCAGAAGGAGTCTACC 1878960 >seq98 Length=2497588 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| |||| |||||||| || | | Sbjct 2387747 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTTGAAGTCGAGTCATCG 2387806 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || ||||||||||| || ||||| || || ||| Sbjct 2387807 GACACCATTGACAACGTGAAGGCGAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 2387866 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || || ||||| ||| | |||||| |||||| ||||||| || ||| Sbjct 2387867 CAACGCCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTATAAC 2387926 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 2387927 ATCCAGAAGGAGTCTAC 2387943 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| | || || || | | Sbjct 2388028 ATGCAGATCTTTGTCAAGACACTTACCGGCAAGACCATCACCTTGGAGGTCGAGTCGTCG 2388087 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | | || || || || || |||||||| || || || |||||| Sbjct 2388088 GATACGATTGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCGCCAGATCAA 2388147 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || || ||||| ||||| ||||| |||||| | ||||| |||||| Sbjct 2388148 CAACGCCTCATCTTCGCTGGCAAGCAGTTGGAGGACGGACGCACCCTATCCGACTACAAC 2388207 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||||| | ||| | ||| | || | |||||||| Sbjct 2388208 ATCCAGAAGGAGTCCACGCTTCATCTCGTTCTTCGTCTCCGCGGAGG 2388254 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || || || || || || ||||||| || ||||| | | Sbjct 2388484 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAGACCATCACTCTGGAGGTGGAGTCTTCT 2388543 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || |||| || || || ||||||||||||||||| || || || Sbjct 2388544 GATACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 2388603 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| || || || | |||||| || ||| | || || || ||| Sbjct 2388604 CAGCGGTTGATCTTTGCGGGGAAGCAACTTGAGGATGGGCGTACCCTTTCAGACTATAAC 2388663 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 2388664 ATCCAGAAGGAGTCCAC 2388680 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || | || || || || || | || Sbjct 2388256 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTGGAGGTCGAGTCGTCC 2388315 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||| || ||||| |||||| Sbjct 2388316 GACACTATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCACCTGATCAA 2388375 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||| | ||||| |||||| | || ||||||||| Sbjct 2388376 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGATTACAAC 2388435 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 2388436 ATCCAGAAGGAGTCGAC 2388452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727109914310