Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq164 161 2e-34 seq131 149 1e-30 seq13 111 3e-19 seq1 91.5 3e-13 >seq164 Length=1123714 Score = 161 bits (178), Expect = 2e-34 Identities = 346/508 (68%), Gaps = 18/508 (4%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| || || |||| | ||||||||||| || |||| ||||| ||||| ||| Sbjct 506607 GGTGAGGACCTTTGCAACTGCCAGTTCTCGCTCGCCTACGGTGCCAAGATCCTGCTCAAC 506548 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | | |||| | ||||||||||| |||| ||||||||| ||||| ||| || | Sbjct 506547 ACCGCTACCCTCCGCCTCAAGCGTGGCCACCGCTATGGTCTCTGCGGTCGCAACGGTACA 506488 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCC-TAACGC 279523 || ||| || || ||||| ||||| | ||||| ||| | || || || || | || | Sbjct 506487 GGAAAGTCGACCCTGATGCGTGCCATCACCAACGGCCAGGTCGAGGGCTTCCCGTCACCC 506428 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCAC 279583 | ||||| | || | || || ||||||||||||||| |||| | || | | Sbjct 506427 GAC-GAGGTCCGCACTTTCTACGTCGAGCACGACATCGACGGCTCTGAGGCCGACACTTC 506369 Query 279584 TGTGTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCC-TGAGGAAA 279642 || |||| ||| | ||| || | | || ||| | ||| || ||||| | Sbjct 506368 CGTCCTCGAGTTC--ATCGT-TGCCGACAAGCGTATCCA----GGCTAACCGCGAGGAGA 506316 Query 279643 TCATCCAGAAACTGGAGGCCAATGGTTT---TGATGAAAG-AATGCGTAATCTGCCAGTA 279698 ||||| || || | | || ||||| ||| || | | ||| | ||| | Sbjct 506315 TCATCGAGGCGCTCGCGTCCGTCGGTTTCTCTGACGAGCGCCAGGCG----CAGCCCATT 506260 Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 ||||| || || ||||||||||||||||||||||| ||| | |||||||| || | Sbjct 506259 GGTTCGCTCTCTGGTGGTTGGAAGATGAAGCTGGCGCTCGCCCGCGCCATGCTCTTCAAG 506200 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 ||||| | || || || || ||||| ||||||||| |||| | |||||| || ||| Sbjct 506199 GCCGACATTCTCCTCCTCGACGAGCCGACCAACCACTTGGATGTCGTCAACGTCGCTTGG 506140 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGA 279846 || | | |||||| || || || |||| Sbjct 506139 CTCGAGAACTACCTCACGAGCCTCAAGA 506112 Score = 93.3 bits (102), Expect = 9e-14 Identities = 132/182 (73%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||| ||||| |||| | || | || || ||| || || Sbjct 505720 GGTCCCAACGGTTCCGGCAAGTCGACCCTCGTCAAGCTGCTCATCGGTGACACCGAGCCC 505661 Query 280239 A-CTGAGG-GGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | ||| || ||| | | |||||||| || ||| || || | ||||||||| |||||| Sbjct 505660 AACTGCGGCGGTGAGATCTGGAAGCACCCTAACCTGGTCATTGGTTACGTCGCCCAGCAC 505601 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || ||||||||||| || | ||||| |||| ||| ||| | | ||||| | ||||| Sbjct 505600 GCCTTCCACCACATTGACCAGCACCTCGACAAGACCCCTCTCGAGTACATGCTCTGGCGT 505541 Query 280356 TA 280357 || Sbjct 505540 TA 505539 >seq131 Length=1833636 Score = 149 bits (164), Expect = 1e-30 Identities = 341/507 (67%), Gaps = 16/507 (3%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || |||| | ||||||||||| || |||| ||||| ||||| ||| Sbjct 1423859 GGTGAGGATCTTTGCAACTGCCAGTTCTCGCTCGCCTACGGTGCCAAGATCCTGCTCAAC 1423800 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | | |||| | | |||||||| |||| || |||||| ||||| ||| || | Sbjct 1423799 ACCGCTACCCTCCGCCTTAAGCGTGGTCACCGCTACGGTCTCTGCGGTCGCAACGGTACT 1423740 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || |||||||| || | ||||| ||| | || || || || | Sbjct 1423739 GGCAAGTCGACCCTCATGCGCGCTATCACCAACGGCCAGGTCGAGGGCTTCCCGTCGCCG 1423680 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCACT 279584 ||||| | || | || || ||||||||||||||| |||| | || | | || Sbjct 1423679 GACGAGGTCCGCACCTTCTACGTCGAGCACGACATCGACGGCTCTGAGGCCGACACCTCT 1423620 Query 279585 GTGTTCGACTTCCTAACGTCT--GACAATCAGGTTATGGAAATCAGCTCTCCTGAGGAAA 279642 || |||| ||| | |||| ||||| | ||| | || | | ||||| | Sbjct 1423619 GTCCTCGAGTTCAT--CGTCGCGGACAAGCG---TATCCAGGCCAAC---CGGGAGGAGA 1423568 Query 279643 TCATCCAGAAACTGGAGGCCAATGGTTTTGATGAAAGAATGCGTAAT---CTGCCAGTAG 279699 ||||| || || | || || || ||| || |||| | | ||| | | Sbjct 1423567 TCATCGAGGCGCTCGCTTCCGTCGGCTTCTCTGAC-GA--GCGTCAGGCGCAGCCCATCG 1423511 Query 279700 GTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG 279759 | || || || |||||||||||||||||||| || ||| | |||||||| || | | Sbjct 1423510 GCTCGCTCTCCGGTGGTTGGAAGATGAAGCTCGCGCTCGCCCGCGCCATGCTCTTCAAGG 1423451 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 | || | || || || |||||||| ||||||||| |||| | |||||| ||||||| Sbjct 1423450 CTGACATTCTCCTCCTCGATGAGCCGACCAACCACTTGGATGTCGTCAACGTCGCCTGGC 1423391 Query 279820 TAGTGTCCTACCTAACCAGTCTGAAGA 279846 | | | |||||| |||||||| |||| Sbjct 1423390 TCGAGAACTACCTCACCAGTCTCAAGA 1423364 Score = 109 bits (120), Expect = 1e-18 Identities = 149/204 (73%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||| ||||| |||| |||| | || || ||| || || Sbjct 1422974 GGCCCCAACGGTTCCGGCAAGTCGACCCTCGTCAAGCTCCTCATCGGTGATACCGAGCCC 1422915 Query 280239 A-CTGAGG-GGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | ||| || ||| | | |||||||| || ||| || || | ||||||||| |||||| Sbjct 1422914 AACTGCGGCGGTGAGATCTGGAAGCACCCTAACTTGGTCATTGGTTACGTCGCCCAGCAC 1422855 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || |||||||||||||| | ||||| |||| ||||||| | | ||||| | ||||| Sbjct 1422854 GCGTTCCACCACATCGACCAGCACCTCGACAAGACTCCTCTCGAGTACATGCTCTGGCGT 1422795 Query 280356 TATGCAAGTGGGCAGGATCTGGAG 280379 || | ||| ||||||| ||| Sbjct 1422794 TACCAGACTGGTGAGGATCTCGAG 1422771 >seq13 Length=966363 Score = 111 bits (122), Expect = 3e-19 Identities = 273/409 (67%), Gaps = 4/409 (1%) Strand=Plus/Plus Query 218697 CTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATT-GTAGGCATGGCACAGGACTATG 218755 |||||| || || || ||||| || | | || || | || | |||| ||||||| Sbjct 191648 CTACCACCATGGCGAACAGAGCTTG-ATGATGACAATCGTCAACTTGGCTCAGGACTTCA 191706 Query 218756 TGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTAT-TG 218814 | |||||||||||||| |||||||| | || ||||||||||| ||| |||| | || Sbjct 191707 TCGGCAGTAACAACATCAACTTGCTCATGCCAAACGGTCAGTTCGGTACTCG-CGATCAA 191765 Query 218815 GGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGC 218874 || || ||||| || || ||||||||||| || || || |||| || || | ||| Sbjct 191766 GGCGGCAAGGACCACGCCTCGGCCAGGTATATTTTCACCGAGCTGTCTCCAATGTCTCGC 191825 Query 218875 CAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCG 218934 | ||| ||| | |||||| ||||| || ||||| |||| || | Sbjct 191826 GCCCTCTTCCATCCCGGCGATGACCCTCTCCTGAACTATCTCAAGGATGACACGGCCGAC 191885 Query 218935 ATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGT 218994 || ||||| |||||||| |||| | ||| || |||| || || || || | ||| Sbjct 191886 ATCGAGCCGGAGTGGTACATGCCGATCCTCCCGCTTGTGCTTGTCAACGGCGCGGAGGGT 191945 Query 218995 ATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGACAAC 219054 ||||| || || | || || | | || | ||||| || |||||| | | ||| Sbjct 191946 ATCGGTACCGGTTGGAGCACAAATGTCCCGTGCTACAACCCTGTCGACATCGTCGCAAAC 192005 Query 219055 GTCAAGCGTCTCATATCTGGCAAGGAGATGGTACCGATGTCTCCGTGGT 219103 || ||| | ||| | |||||||||| |||||| ||| |||| Sbjct 192006 ATCCGGCGCCGCATGAACGATGAGGAGATGGTGCCGATGCTTCCATGGT 192054 >seq1 Length=2640167 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 251542 TGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCC 251601 ||||| || || || || ||||| || || | |||||||| || || || | ||| Sbjct 599701 TGATAGTCCGACACTCGCTTCTCGAAAAAGTTTGTCTTGCCCTGGAGTGATATCAAGTCC 599642 Query 251602 ATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATG 251661 ||||||||||| || || || || ||||| ||||| | ||| || | || |||| Sbjct 599641 ATGAAGTCGAACGGATTCGTCGCGTTGTAGTGCTTCTCGTTGCCTAGGGAGACCAAGAGC 599582 Query 251662 CGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || ||||| |||||||| | ||||| | |||||| ||| |||||| || || Sbjct 599581 CGATCTGCGACAAACTCGATGTACTGGCGCATCAGAGCAGCGTTCATACCGAT 599529 Score = 89.7 bits (98), Expect = 1e-12 Identities = 206/304 (68%), Gaps = 15/304 (5%) Strand=Plus/Plus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||||| |||||||| | ||||||| |||||| || | || || ||||| | || Sbjct 596534 GTGCATGCCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCC 596593 Query 251904 ACGGTTCCTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACAC 251962 ||| ||| ||||||||||||| | ||| ||||| |||||||| | | ||||||||| Sbjct 596594 ACGCTTCTTGAGCCAGAAGATGGACGC-GAAGGAACCAGAGAAGAAGATACCCTCGACGG 596652 Query 251963 ACACCCATGCAACAAGGCGCTCAGCAAACGA------CTTGTCCTGCGACAAGAACTTCT 252016 | | || |||||||||||||| || || |||||| || | | Sbjct 596653 CGGCGAACGCGACAAGGCGCTCAGCGAAGGAAGATTTCTTGTC---AGAGATCCAGCGGA 596709 Query 252017 GTGCCCATGCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGT 252076 | ||||| | |||||||| || |||||| || ||||| || || || || | | Sbjct 596710 GGGCCCAATCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTCGAACAG-GTGC 596768 Query 252077 TCCGCTCGGCATC--GTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATG 252134 | ||| | || || ||| | |||| || |||| || || |||||| |||| || || Sbjct 596769 T-CGCGCTGCTTCGGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTACGTCTCGGAGTG 596827 Query 252135 GATG 252138 |||| Sbjct 596828 GATG 596831 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| || ||||| | ||||||||||| |||||||| || Sbjct 596199 TCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCAAAGGGGTTGGTC 596258 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||| | || || || |||| | ||||| || || ||||| | Sbjct 596259 GCGTTGTAGACCTTCTCGTCACCGAGCGCGACGAGCAGACGGTCGGCGACGAACTCGATG 596318 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || || | ||| || | |||||||||||||| Sbjct 596319 TATTGGCACATGAGCTTCGAGTTCATGCCAAT 596350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834508566334