Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq98 168 2e-36 seq120 158 3e-33 seq13 100 7e-16 seq1 95.1 3e-14 >seq98 Length=2497588 Score = 168 bits (186), Expect = 2e-36 Identities = 180/235 (77%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | ||| |||||||||| |||| || || ||||| || |||| Sbjct 2388258 CATG-CCTCCGCGGAGACGAAGAACGAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGT 2388200 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||||||||| || || || || || |||||||| || || |||||| | Sbjct 2388199 CGGATAGGGTGCGTCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGTTGTTGA---T 2388143 Query 288362 CTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 |||| ||| || || ||||||||||| ||||| |||||||| || || | ||| || Sbjct 2388142 CTGGCGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTTGTCAATCGTATCCGACG 2388083 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || | ||||| ||||| ||||| || |||||||| || |||||||| Sbjct 2388082 ACTCGACCTCCAAGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 2388028 Score = 132 bits (146), Expect = 1e-25 Identities = 147/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||||| ||| ||||| || || || | || || || |||||| Sbjct 2387937 TCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAG 2387878 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || || ||||| |||||| || ||||| || || ||||| ||||| |||||| Sbjct 2387877 ATGAGGCGTTGTTGG---TCTGGGGGAATGCCTTCCTTGTCTTGGATCTTCGCCTTCACG 2387821 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || ||||| || ||||||||||| || || || |||||| Sbjct 2387820 TTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCCGTGAGGGTCTTG 2387761 Query 288460 ACGAATATCTGCATT 288474 ||||| ||||||||| Sbjct 2387760 ACGAAGATCTGCATT 2387746 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || || |||||||| || || |||||||| || || | |||| || || || ||| Sbjct 2387572 CCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTATCGGAGGACTCCACCTCG 2387513 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| || || |||||||| ||||| |||||||| Sbjct 2387512 AGGGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATCTGCAT 2387469 >seq120 Length=2004100 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| ||||| |||| |||||| || || ||||| || ||||||| | Sbjct 1878648 CCACCACGGAGACGAAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1878707 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||| || || ||||||||||||||||| || ||| Sbjct 1878708 AGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 1878767 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || || || ||||| || || | ||| || || || Sbjct 1878768 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACC 1878827 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || |||||||| ||||| || |||||||| || || ||||| Sbjct 1878828 TCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | || || || || ||||| || || | Sbjct 1879158 CCACCACGGAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAA 1879217 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 |||||||| || ||||| | || || || ||||||||||| ||||| || |||| Sbjct 1879218 AGCGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG---ATCTGGA 1879274 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || || || || ||||| || || | || ||| || Sbjct 1879275 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCG 1879334 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || || || ||||||||||| |||||||| Sbjct 1879335 ACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| ||| ||||| || || || | || || || || ||| Sbjct 1879752 TCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAG 1879811 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||| || || || || |||||||| || || || ||||| Sbjct 1879812 ATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 1879871 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || || ||||| ||||| ||||| || || |||||||| ||| Sbjct 1879872 TCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAGTCTTCACG 1879931 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 1879932 AATATCTGCAT 1879942 Score = 109 bits (120), Expect = 1e-18 Identities = 142/194 (73%), Gaps = 7/194 (4%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| | || ||||| ||||| || | || || || || || Sbjct 1878967 TCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCAAA- 1879025 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| ||||| || |||||| || || || || || ||||| ||||| || ||| Sbjct 1879026 ATCAGGCGCTGCTGG---TCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGACG 1879082 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| || || || ||||||||||||||||| |||||||| ||||| Sbjct 1879083 TTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTC 1879142 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 1879143 ACGAAGATTTGCAT 1879156 Score = 109 bits (120), Expect = 1e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 |||| || | ||| ||| || || || || || |||| | ||| || ||||| || | Sbjct 1879455 CGAGGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGA 1879514 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 || || || || || || |||||||| || || || ||||| || ||||||| Sbjct 1879515 GCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGA 1879574 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | || || ||||| || || || | ||| ||||| || ||||||||||| ||||| | Sbjct 1879575 TCTTGGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGC 1879634 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| |||||||| || |||||||| Sbjct 1879635 CCGTCAGGGTCTTGACAAAGATCTGCAT 1879662 >seq13 Length=966363 Score = 100 bits (110), Expect = 7e-16 Identities = 177/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 326078 TCGGTCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCG 326137 || ||||||||||| | |||||||| || || | |||||| ||||| | || | Sbjct 190831 TCCGTCATGATCATGAGCTGACCGTATCGCAGGTCGCTCGTGTCCTTGTAGTCCTTGTTG 190772 Query 326138 GTTTGAAGGCCGAGAATTTGTTTGAGCGCTGTGA-TTTCTTCGTTCTTCGTGATGCTTGC 326196 || || |||||||| | |||| | | ||| |||| ||||||||| |||| || | Sbjct 190771 TGCTGGAGACCGAGAATCTTCTTGAT-GTTCTGAATTTCCTCGTTCTTCATGAT-CTGGT 190714 Query 326197 CACGGATG-CATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCT 326255 | | || | ||||||||||||| || ||||| ||||| ||||| || ||||| | | Sbjct 190713 CGTGCTTGGCTTCGCGGACGTTCAGAAGCTTTCCTCGAAGCGGGAAGACACCATAGTTGT 190654 Query 326256 CGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCA 326315 ||||||| | || || ||||| | || | | | ||||| || || ||||||| Sbjct 190653 CGCGACCAATAACACTAAGGCCTGCCACGGCCAAGGACTTGGCGGAGTCTCCTTCCGTCA 190594 Query 326316 GAATGAGAGTGCA 326328 | ||||| || || Sbjct 190593 GGATGAGGGTACA 190581 Score = 84.2 bits (92), Expect = 5e-11 Identities = 128/178 (72%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 325337 GCGTGATCCTTACCACCCTGCAATCTCGA--ACCGAACTGGCCCTCCGGCAACAACCAGT 325394 ||||| ||||| || || || ||| ||| ||||||||| || | |||| | | ||| Sbjct 191782 GCGTGGTCCTTGCCGCCTTG--ATCGCGAGTACCGAACTGACCGTTTGGCATGAGCAAGT 191725 Query 325395 TGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCC-CTTGCAGAGAT 325453 ||||||| || || |||| | ||||| || | ||| ||||| ||| | | || | Sbjct 191724 TGATGTTGTTACTGCCGATGAAGTCCTGAGCCAAGTTGACGATTGTCATCATCAAGCTCT 191665 Query 325454 GCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCT 325511 | |||||||||||| |||||| | ||| | || ||||||| || ||| ||||||| Sbjct 191664 G-TTCGCCATGGTGGTAGGCGGCCTTCTCCGAAATGTAACCGACGAGCTGAGCAACCT 191608 >seq1 Length=2640167 Score = 95.1 bits (104), Expect = 3e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 || || ||||| | | |||||| ||||| ||||| ||||| || || ||| | || Sbjct 596350 ATTGGCATGAACTCGAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGACCGTCTGCTC 596291 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 || |||||| | ||||| || ||||| ||| || ||||| | ||| ||||| | Sbjct 596290 GTCGCGCTCGGTGACGAGAAGGTCTACAACGCGACCAACCCCTTTGACTTCATGGACATG 596231 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 || |||||| | || ||||| ||||||||||| ||||| || |||||| Sbjct 596230 ATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGGGTGTCCGACTA 596181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651770107972