Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 136 9e-27 seq13 105 1e-17 >seq1 Length=2640167 Score = 136 bits (150), Expect = 9e-27 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| |||||||||||||| | |||||| | || |||||||| ||||| |||||||| | Sbjct 596354 GCTCATTGGCATGAACTCGAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGACCGTCT 596295 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || ||||||| ||| | ||||| || |||||| | | |||||||||| ||| ||||| Sbjct 596294 GCTCGTCGCGCTCGGTGACGAGAAGGTCTACAACGCGACCAACCCCTTTGACTTCATGGA 596235 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | || ||||| || || || || ||||||||||| ||||| || Sbjct 596234 CATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGGGT 596190 >seq13 Length=966363 Score = 105 bits (116), Expect = 1e-17 Identities = 265/397 (67%), Gaps = 12/397 (3%) Strand=Plus/Minus Query 297242 ACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTC 297301 |||||||| || ||||| | |||| ||| || ||||||||||||||| || | Sbjct 191998 ACGATGTCGACAGGGTTGTAGCACGGGACATTTGTGCTCCAACCGGTACCGATACCCTCC 191939 Query 297302 GAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCA 297361 | || || || || | ||| | | |||| || |||| || ||||| | | | Sbjct 191938 GCGCCGTTGACAAGCACAAGCGGGAGGATCGGCATGTACCACTCCGGCTCGATGTCGGCC 191879 Query 297362 CCGTCATCATACAGATATTTCAGAAGA---TTATCGTCCGTATCGACGAAAACCTGTCGA 297418 |||||| | ||||| ||||| ||| | |||| | | || || || | ||| Sbjct 191878 GTGTCATCCTTGAGATAGTTCAGGAGAGGGTCATCGCCGGGATGGAAGAGGGCG---CGA 191822 Query 297419 GTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGC 297478 | | || ||| | ||||||||||| | || ||||| ||||| || || || Sbjct 191821 GACATTGGAGACAGCTCGGTGAAAATATACCTGGCCGAGGCGTGGTCCTTGCCGCCTTG- 191763 Query 297479 AATCTCGA--ACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACAT 297536 ||| ||| ||||||||| || | |||| | | |||||||||| || || |||| Sbjct 191762 -ATCGCGAGTACCGAACTGACCGTTTGGCATGAGCAAGTTGATGTTGTTACTGCCGATGA 191704 Query 297537 AATCCTGTGCAAGGTTCACGATGGTC-CCTTGCAGAGATGCTTCGCCATGGTGATAGGCG 297595 | ||||| || | ||| ||||| ||| | | || || |||||||||||| |||||| Sbjct 191703 AGTCCTGAGCCAAGTTGACGATTGTCATCATCAAGCTCTG-TTCGCCATGGTGGTAGGCG 191645 Query 297596 CTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCT 297632 | ||| | || ||||||| || ||| ||||||| Sbjct 191644 GCCTTCTCCGAAATGTAACCGACGAGCTGAGCAACCT 191608 Score = 95.1 bits (104), Expect = 3e-14 Identities = 176/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 298199 TCGGTCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCG 298258 || ||||||||||| | |||||||| || || | |||||| ||||| | || | Sbjct 190831 TCCGTCATGATCATGAGCTGACCGTATCGCAGGTCGCTCGTGTCCTTGTAGTCCTTGTTG 190772 Query 298259 GTTTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGC 298317 || || |||||||| | |||| | ||| ||||| ||||||||| |||| || | Sbjct 190771 TGCTGGAGACCGAGAATCTTCTTGATGTTCTG-AATTTCCTCGTTCTTCATGAT-CTGGT 190714 Query 298318 CACGGAT-GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCT 298376 | | | || |||||||| |||| || ||||| ||||| ||||| || ||||| | | Sbjct 190713 CGTGCTTGGCTTCGCGGACGTTCAGAAGCTTTCCTCGAAGCGGGAAGACACCATAGTTGT 190654 Query 298377 CGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCA 298436 ||||||| | || || ||||| | || | | | ||||| || || ||||||| Sbjct 190653 CGCGACCAATAACACTAAGGCCTGCCACGGCCAAGGACTTGGCGGAGTCTCCTTCCGTCA 190594 Query 298437 GAATGAGAGTGCA 298449 | ||||| || || Sbjct 190593 GGATGAGGGTACA 190581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877541266900