Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 147 3e-30 seq98 105 8e-18 seq35 98.7 1e-15 >seq1 Length=2640167 Score = 147 bits (162), Expect = 3e-30 Identities = 340/505 (67%), Gaps = 13/505 (3%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| | | |||||| || ||||||||| || || |||||||| || |||||| Sbjct 596541 CCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCCACGCTTC 596600 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | || ||||| ||||||||||| ||||| || |||||| Sbjct 596601 TTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAC 596660 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA---AACCACTTCATCGCCCAC 126241 || | || |||||||| ||||| || || ||||| | ||| | ||||| Sbjct 596661 GCGACAAGGCGCTCAGCGAAGGA---AGATTTCTTGTCAGAGATCCAGCGGAGGGCCCAA 596717 Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTC 126300 | ||||| |||| || || |||| ||||| ||| || || || || | || | | | Sbjct 596718 TCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTCGAACAGGTGCTCGCGCTGC 596777 Query 126301 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TT 126359 | || |||||||||||| | || ||||| || || || ||| ||||| | | Sbjct 596778 T-TCGGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCTC 596836 Query 126360 CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAA 126419 ||| || | ||| | ||||||| |||| || || | ||| ||||| | | | Sbjct 596837 CATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGACCTGCACCTCGTTGCTGA 596895 Query 126420 AATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATAT 126479 || | || || || ||||| || |||||| | || || || || |||| || Sbjct 596896 AACGCTCGACGAGGTTTTCGTTGACAATACCGTCGGACGCGGCGAAGAAGGCGAGGACAT 596955 Query 126480 ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCG 126536 | ||||| | | || || ||||| | || | ||||||||| ||||||||| | Sbjct 596956 GCGAGATGAAGTATCGCTCGTTGTCGTTGAGACGGTTGGTCCAGTCGTGAAGATCCTTGG 597015 Query 126537 AGAGATCTACCTCCTCCGCAGTCCA 126561 |||| || | |||||| || ||||| Sbjct 597016 AGAGGTCCATCTCCTCAGCGGTCCA 597040 Score = 96.9 bits (106), Expect = 4e-15 Identities = 172/245 (70%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | |||||||| | | |||||| |||||||||||| || || Sbjct 599360 GCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTGAGGCCG 599301 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAACCCGAGAAGAAGAT 126165 |||||||| ||||||||||| | |||||| || | | ||||| ||||||||||| || Sbjct 599300 GGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCAAAACTT-CCCGAGAAGAATAT 599242 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA-GCGCGACTTTGTGTCA- 126223 ||| || || || ||||| | || | || | || || | || |||| | | Sbjct 599241 TCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAATGATGATCG--CTTGTCTGAG 599184 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | ||| || ||||| | ||||| |||| ||| ||||||| ||||| ||||| || Sbjct 599183 ATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCTATCGCGTCG 599124 Query 126284 AAGAG 126288 || || Sbjct 599123 AACAG 599119 >seq98 Length=2497588 Score = 105 bits (116), Expect = 8e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 10957 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAAC 11016 |||||| | ||| || |||||||| | ||| || || ||||| || | ||| | Sbjct 1730164 CTTACCAATGGCATCGATTTCATCCACGAAGACAATGCACGGCGCGTTCTTCTTGGCCAT 1730105 Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGC 11076 |||||| || ||||| | || |||||||| || |||||||| || || | || Sbjct 1730104 GGCAAAGAGGTCCCGGACGCGAGAGGAGCCGACACCGACGAACATTTCGACGAACTCGGA 1730045 Query 11077 GGCGGAACATTGGAT-GAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11135 | |||| || | | ||||||||| |||| ||| |||||| ||||| ||||||||||| Sbjct 1730044 GCCGGA-CACGGAAAAGAAGGGGACATTGGCTTCGCCCGCGGTGGCTTTGGCGAGGAGGG 1729986 Query 11136 TCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 |||| || || || || || | |||| |||||| || || ||| | ||||| Sbjct 1729985 TCTTACCAGTACCGGGAGGACCGGAAAGAATGGCACCGCGAGGAATCTTAGCACC 1729931 >seq35 Length=923662 Score = 98.7 bits (108), Expect = 1e-15 Identities = 232/344 (67%), Gaps = 5/344 (1%) Strand=Plus/Plus Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 || || ||||| ||||| || || || |||| |||||| || || |||||| || Sbjct 866225 GGGAGAGCGATAGACGCAAGGTTGCAAACAGCGGTCTCCTCGGGTGAAGAGTACTCGATG 866284 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 || ||||| |||| ||||| ||| |||||||| | ||||| || || ||||| | Sbjct 866285 ATCTCCGTGCACAGGTTTGACGACTTGATGGTGCCGAGGTTCTGCTGGTTAGACTTCGCA 866344 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || | ||||||||| |||||| | || || ||||| |||| | || |||||| Sbjct 866345 TTGGCAGAATCCTTGTAGAGCATGAAGGGTCCACCAGTCTCGATTTGCGCCTCCAGAATA 866404 Query 114644 GCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 114702 || | ||| | | || ||| || | | || | | | || ||||| |||||| Sbjct 866405 GCATACCAAAGCTTCTGCGCCTCG-ATGGTCTTGCGGCCGCGACCCTCGCGCTCGTAGCG 866463 Query 114703 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC-TGAGAGCCCTGGTGCCTTATCTG 114761 ||| || | || ||||| | ||| | | || ||| || || ||||||| | || Sbjct 866464 CTCGTACAGCTCCTCGAACTCAGCTCCCCAGACTTCGTGA-AGACCAGGTGCCTCGT-TG 866521 Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 ||||||| || | ||| || || |||||||||||||||| Sbjct 866522 GGCAGAACAGCGTCCACTGGCCGTTGGACTCAACACGCTTCATG 866565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352300755920