Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq120 125 8e-24 >seq120 Length=2004100 Score = 125 bits (138), Expect = 8e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || || ||||| || | || || ||| |||| || || ||||| || Sbjct 1878678 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTGCTTGCCG 1878737 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131 ||||| || || ||||||||||||| || | || |||||||| ||| ||| ||| Sbjct 1878738 GCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTG 1878797 Query 42132 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190 | ||| | | | ||||||| || || || |||| || || || ||||| || ||||| Sbjct 1878798 A-CGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGGTGAGCGT 1878856 Query 42191 CTTTACAAAGATTTGCAT 42208 ||| |||||||||||||| Sbjct 1878857 CTTGACAAAGATTTGCAT 1878874 Score = 123 bits (136), Expect = 3e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| |||||||| | || || || |||| || |||||||| ||||| || Sbjct 1879472 TCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAA 1879531 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||| | || | || ||||||||| ||| || || | | Sbjct 1879532 ATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTA 1879591 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | |||||| ||||| || |||| ||||||||| |||||||| || ||||| ||| Sbjct 1879592 TCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTCTTGACA 1879651 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 1879652 AAGATCTGCAT 1879662 Score = 113 bits (124), Expect = 5e-20 Identities = 143/193 (74%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | ||||| || |||| || |||||||||||||| || Sbjct 1878966 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCAAA 1879025 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | || ||||||||| ||| || |||| ||| Sbjct 1879026 -ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGT 1879083 Query 42137 CGCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || | | || || || || |||| |||||| || ||||| || |||||||| | Sbjct 1879084 TGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTCA 1879143 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1879144 CGAAGATTTGCAT 1879156 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| | || || || | || || |||||||| || || || Sbjct 1879751 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAA 1879810 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | ||| | || |||||||||| ||| || |||| ||| Sbjct 1879811 GATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 1879869 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || || || |||| |||||||| |||||||| || ||||| | Sbjct 1879870 TGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAGTCTTCA 1879929 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 1879930 CGAATATCTGCAT 1879942 Score = 102 bits (112), Expect = 9e-17 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| |||||||||||||| | || || || | || || |||||||| || ||||| Sbjct 1879193 CTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 1879252 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || |||||||| || | || | || |||||||||| ||| | || | |||| || Sbjct 1879253 GATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTGA-CG 1879310 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | ||||| ||| || || || | ||||| || || ||||| || ||||| Sbjct 1879311 TTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTG 1879370 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 1879371 ACGAAGATCTGCAT 1879384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211618512160