Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq98 123 2e-23 seq120 113 5e-20 >seq98 Length=2497588 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| ||||| | ||| || || || || ||||| || |||| | ||| ||| | || Sbjct 2388696 AAGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAAAGGGTACGCCCATC 2388637 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||| ||||| || ||| | || | |||||||||||| || ||||| || || || || Sbjct 2388636 CTCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTTGTC 2388577 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | |||||| | ||||| || | ||| | ||| Sbjct 2388576 CTGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACCTCCAGAGTGATGGT 2388517 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || ||||| || || |||||||||||||| Sbjct 2388516 CTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | | ||| || ||||||| ||| || || || || |||||||| || | Sbjct 2388254 CCTCCGCGGAGACGAAGAACGAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAT 2388195 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||| || | ||||||||| || | ||||| || || || || || || Sbjct 2388194 AGGGTGCGTCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCTGGCGGG 2388135 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCA 64394 || || || || || || || || ||| || || | ||||| || || || | Sbjct 2388134 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTTGTCAATCGTATC--CGACGACTCGA 2388077 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | |||||||||||| | || || || || || ||||| Sbjct 2388076 CCTCCAAGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 2388028 >seq120 Length=2004100 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||||||||| | || |||||| | || ||||||||||||||| Sbjct 1879746 GTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 1879805 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| ||||||||||| || ||||| || || || || || || || ||| Sbjct 1879806 GCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1879865 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| || || || || | || | ||||||||| || | ||| Sbjct 1879866 ACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAGTC 1879925 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 1879926 TTCACGAATATCTGCAT 1879942 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || |||||||||||||| | | || || |||| || ||||||||||| Sbjct 1879466 GTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTGCTTGCCA 1879525 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||| ||||||||||| |||||||| ||||| || || || || || ||| Sbjct 1879526 GCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 1879585 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | || | ||||||||| |||| || Sbjct 1879586 ACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTC 1879645 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 1879646 TTGACAAAGATCTGCAT 1879662 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || |||| ||| || || || |||||||| || | || ||| ||| |||| Sbjct 1878662 AAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTC 1878721 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || || ||||||||||| | || || |||||||||||||| || || ||||| || || Sbjct 1878722 CTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTC 1878781 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || ||| ||| || || | || || | || || || | || | || Sbjct 1878782 TTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGT 1878841 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | || || || || |||||||| Sbjct 1878842 CTTGCCGGTGAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 || |||| || || || || ||||||||||| || | | ||||| |||| || ||| Sbjct 1878952 AGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGC 1879011 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||| || ||| |||| || ||||||||||| || ||||| || || || ||||| || Sbjct 1879012 TGCTTACCAGCA-AAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATC 1879070 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| || || | ||||| | || || || | || | ||||||||| Sbjct 1879071 TTCGCCTTGACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCG 1879130 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || || ||||| |||||||| Sbjct 1879131 GTCAGCGTCTTCACGAAGATTTGCAT 1879156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643713272560