Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq35 104 2e-17 >seq35 Length=923662 Score = 104 bits (114), Expect = 2e-17 Identities = 168/239 (70%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 || |||||| ||| || || ||| || || ||| | || || ||||| || | ||| Sbjct 866854 TCTTACATCGCCGGCACGAACGGCTATTCGAATGGCATTGTTCCCATGCTTCGCG-CTT- 866797 Query 94129 AACAACGC---GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCG 94185 || |||| ||| ||||| || ||||||||||| | | | |||| ||||||| Sbjct 866796 -ACGACGCAACGGCTCGCTATGTCGACCAGGGTGGCAATAAGCGTCCGGGTGCTTTCGCC 866738 Query 94186 GTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC 94245 |||| ||||||||||||||||| || | | ||||||||||| || ||||| || Sbjct 866737 ATCTACCTCGAGCCCTGGCACGCCGATATCTTCGACTTCATCGACCTCCGTAAGAATCAT 866678 Query 94246 GGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 || || || || | ||| | |||||||||||||| || ||| | || || || || Sbjct 866677 GGTAAGGAGGAGGTTCGTGCCCGCGACCTCTTCTACGCGCTGTGGATTCCCGATCTCTT 866619 Score = 89.7 bits (98), Expect = 5e-13 Identities = 180/268 (67%), Gaps = 8/268 (3%) Strand=Plus/Minus Query 95292 CAACGGCTCCGTCCAGAACATC--CCGCAAATACCGGAGGACATCAAGGCGCTCTACAAG 95349 ||||||||| | |||| |||| | ||| | || || || ||||||||| |||||||| Sbjct 865548 CAACGGCTCGATTCAGAGCATCAACGGCA--TTCCTGACGAGATCAAGGCGATCTACAAG 865491 Query 95350 ACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTC 95409 || || ||||||||| ||||| | | ||||||| ||| || | ||| || | ||| Sbjct 865490 ACTGTCTGGGAGATCTCGCAGAAGAAGGTCCTCGACCTCGCCGCAGACCGTGGCGCGTTC 865431 Query 95410 ATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCG--CGGAAAAATAA 95467 ||||||||||| | || |||||| | || ||| | | | Sbjct 865430 ATCTGCCAGAGCCAGAGCTTGAACGTGCACCT-GCAGAGCCC-GACGATCGGCCAGCTGA 865373 Query 95468 CGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATTATTTGCGAA 95527 || |||| |||||||| |||| ||||| ||||||||||| ||||| || | || | Sbjct 865372 CGAGCATGCACTTCTACGGTTGGAAGAAGGGCCTCAAGACCGGCATGTACTACCTCCGTA 865313 Query 95528 CCAGGCCAAAGGCGGACTCCATACAGTT 95555 | | || |||| | |||| ||||| Sbjct 865312 CACGCCCCGCGGCGCAGGCCATCCAGTT 865285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722123977040