Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq120 118 1e-21 >seq1 Length=2640167 Score = 120 bits (132), Expect = 3e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTT 52709 || ||||| |||| ||| | ||||||||| || || ||||||| | ||||||||||| Sbjct 596368 GCTCTGCCCGTCGCGCTCATTGGCATGAACTCGAAGCTCATGTGCCAATACATCGAGTTC 596309 Query 52710 GTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCG 52769 || || || |||||| | || |||||| | ||| || |||||| ||| || Sbjct 596308 GTCGCCGACCGTCTGCTCGTCGCGCTCGGTGACGAGAAGGTCTACAACGCGACCAACCCC 596249 Query 52770 TTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 ||||| || ||| ||| || ||||| |||||||||||||||| ||||||||||| || Sbjct 596248 TTTGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGGGT 596190 Score = 105 bits (116), Expect = 7e-18 Identities = 135/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGC-GCAGTCCATGTGCGAGTACATCGAGTT 52708 ||||| | ||||| || | || |||||||| || | ||| || ||||||||||||| Sbjct 599511 GCGCTATCCGTCGATCTCATCGGTATGAACGCTGCTCTG-ATGCGCCAGTACATCGAGTT 599569 Query 52709 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATC 52767 ||| || ||||| || ||||| || || || | | ||| ||| |||||| |||| Sbjct 599570 TGTCGCAGATCGGCTCTTGGTCTCCCTAGG-CAACGAGAAGCACTACAACGCGACGAATC 599628 Query 52768 CGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAG 52827 |||| || || ||| || || || || |||||||||| ||||||||||||||||||| Sbjct 599629 CGTTCGACTTCATGGACTTGATATCACTCCAGGGCAAGACAAACTTTTTCGAGAAGCGAG 599688 Query 52828 T 52828 | Sbjct 599689 T 599689 >seq120 Length=2004100 Score = 118 bits (130), Expect = 1e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||| ||| || ||||| ||||||||| || || || | | Sbjct 1879469 GATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTGCTTGCCAGCA 1879528 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || |||||||| ||||||||||| || ||||| ||||| ||| || || | Sbjct 1879529 AAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACA 1879588 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| || || ||||||| ||| | || || || ||||| || || Sbjct 1879589 TTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTCTTG 1879648 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 1879649 ACAAAGATCTGCATG 1879663 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| | |||||| |||||||||||| || |||| | Sbjct 1878683 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAA 1878742 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| |||||||| ||||| || || || ||||| ||||| ||| ||| || | | Sbjct 1878743 GATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTT 1878802 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||| ||||||| || | ||| || || || || || || || Sbjct 1878803 GTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGAC 1878862 Query 138603 AAAAATCTGCATG 138615 ||| || |||||| Sbjct 1878863 AAAGATTTGCATG 1878875 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/194 (70%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| | ||| || |||||| || || ||||| | | Sbjct 1878964 GACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCA 1879023 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || ||||| ||||| || || || || || ||||| ||| || || | Sbjct 1879024 -AAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGACG 1879082 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||| || | ||||| ||||||| ||| | ||| || || ||||| || || Sbjct 1879083 TTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTC 1879142 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 1879143 ACGAAGATTTGCAT 1879156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261320629280