Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq120 120 3e-22 seq98 89.7 5e-13 >seq120 Length=2004100 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||| || || ||||| ||||| ||||| || || ||| | Sbjct 1878648 CCACCACGGAGACGAAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1878707 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | ||| || || ||| | |||| || |||||||| ||||| Sbjct 1878708 AGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 1878767 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 |||||||| || ||||| || ||| |||| || | || | |||||||||||||| || Sbjct 1878768 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGA-CGTTGTCGATCGTGTCGGAAGACTCAAC 1878826 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| |||| ||| |||||||| || || || ||||| |||||||| Sbjct 1878827 CTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| || |||||||| || |||||||| || || ||||| || || |||| || | Sbjct 1879026 ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGTT 1879084 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | ||| || ||||||||||| ||||| || | ||| |||||||| || || || || Sbjct 1879085 GTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTCAC 1879144 Query 45329 AAAAATTTGCAT 45340 || |||||||| Sbjct 1879145 GAAGATTTGCAT 1879156 >seq98 Length=2497588 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAAT 45194 || || || || || ||||| ||||| ||||| ||| || || ||| || | Sbjct 2387952 AGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGC 2387893 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | || | ||||| ||||| || ||||||||||| || ||||| || Sbjct 2387892 TGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATC 2387833 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || || | || | || | |||||| || ||||||||||| || || | ||| ||||| Sbjct 2387832 TTCGCCTTCA-CGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCC 2387774 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACCAA 45351 || || || || || || || ||||| ||| || || Sbjct 2387773 CGTGAGGGTCTTGACGAAGATCTGCATTCCGCCACGAA 2387736 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||||||||| | | || ||||| ||||| || ||||| ||||| || || ||| Sbjct 2388257 ATGCCTCCGCGGAGACGAAGAACGAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCG 2388198 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||||| || || || ||| | || | ||||| || || ||| Sbjct 2388197 GATAGGGTGCGTCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCTGGC 2388138 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || ||||| || || || || | || | || | || || || ||||| Sbjct 2388137 GGGATGCCCTCCTTATCCTGGATCTTCGCCTTCA-CGTTGTCAATCGTATCCGACGACTC 2388079 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || | || | || |||||||| || || || ||||| || ||||| Sbjct 2388078 GACCTCCAAGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 2388028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002216893040