Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq98 93.3 5e-14 seq35 93.3 5e-14 >seq1 Length=2640167 Score = 138 bits (152), Expect = 1e-27 Identities = 338/505 (67%), Gaps = 13/505 (3%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||| | | |||||| || ||||||||| ||||| |||||||| || |||||| Sbjct 596541 CCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCCACGCTTC 596600 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | |||||| || | || || |||||||||||||| ||||| || |||||| Sbjct 596601 TTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAC 596660 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA---AACCACTTCATCGCCCAC 127714 || | || ||||| || ||||| || || | ||| | ||| | ||||| Sbjct 596661 GCGACAAGGCGCTCAGCGAAGGA---AGATTTCTTGTCAGAGATCCAGCGGAGGGCCCAA 596717 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTC 127773 | ||||| |||| || || |||| ||||| ||| || || || || | || | | | Sbjct 596718 TCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTCGAACAGGTGCTCGCGCTGC 596777 Query 127774 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TT 127832 | || |||||||||||| | || ||||| || || || ||| ||||| | | Sbjct 596778 T-TCGGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCTC 596836 Query 127833 CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAA 127892 ||| || | ||| | ||||||| |||| || || | ||| ||||| | | | Sbjct 596837 CATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGACCTGCACCTCGTTGCTGA 596895 Query 127893 AATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATAT 127952 || | || || || ||||| || |||||| | || || || || |||| || Sbjct 596896 AACGCTCGACGAGGTTTTCGTTGACAATACCGTCGGACGCGGCGAAGAAGGCGAGGACAT 596955 Query 127953 ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTG 128009 | ||||| | | || || ||||| | || | ||||||||| |||||||| | Sbjct 596956 GCGAGATGAAGTATCGCTCGTTGTCGTTGAGACGGTTGGTCCAGTCGTGAAGATCCTTGG 597015 Query 128010 AGAGATCTACCTCCTCCGCAGTCCA 128034 |||| || | |||||| || ||||| Sbjct 597016 AGAGGTCCATCTCCTCAGCGGTCCA 597040 >seq98 Length=2497588 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 12872 CTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAAC 12931 |||||| | ||| || ||||| || | ||| || || ||||| || | ||| | Sbjct 1730164 CTTACCAATGGCATCGATTTCATCCACGAAGACAATGCACGGCGCGTTCTTCTTGGCCAT 1730105 Query 12932 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 12991 |||||| || || || | || |||||||| || ||||| || || || | || Sbjct 1730104 GGCAAAGAGGTCCCGGACGCGAGAGGAGCCGACACCGACGAACATTTCGACGAACTCGGA 1730045 Query 12992 GGCGGAACATTGGAT-GAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 13050 | |||| || | | ||||||||| |||| ||| |||||| ||||| ||||||||||| Sbjct 1730044 GCCGGA-CACGGAAAAGAAGGGGACATTGGCTTCGCCCGCGGTGGCTTTGGCGAGGAGGG 1729986 Query 13051 TCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 |||| || || || || || | |||| |||||| || || ||| | ||||| Sbjct 1729985 TCTTACCAGTACCGGGAGGACCGGAAAGAATGGCACCGCGAGGAATCTTAGCACC 1729931 >seq35 Length=923662 Score = 93.3 bits (102), Expect = 5e-14 Identities = 231/344 (67%), Gaps = 5/344 (1%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || || ||||| ||||| || || || |||| |||||| || || |||||| || Sbjct 866225 GGGAGAGCGATAGACGCAAGGTTGCAAACAGCGGTCTCCTCGGGTGAAGAGTACTCGATG 866284 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || ||||| |||| ||||| ||| |||||||| | ||||| || || ||||| | Sbjct 866285 ATCTCCGTGCACAGGTTTGACGACTTGATGGTGCCGAGGTTCTGCTGGTTAGACTTCGCA 866344 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || | ||||||||||||||| | || || ||||| |||| | || |||||| Sbjct 866345 TTGGCAGAATCCTTGTAGAGCATGAAGGGTCCACCAGTCTCGATTTGCGCCTCCAGAATA 866404 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || | ||| | | || ||| || | | || | | | || ||||| |||||| Sbjct 866405 GCATACCAAAGCTTCTGCGCCTCG-ATGGTCTTGCGGCCGCGACCCTCGCGCTCGTAGCG 866463 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTG 116722 ||| || |||| ||||| | ||| ||| || | | || || ||||||| | || Sbjct 866464 CTCGTACAGCTCCTCGAACTCAGCTCCC-CAGACTTCGTGAAGACCAGGTGCCTCGT-TG 866521 Query 116723 GACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 | ||||| || | ||| || || |||||| ||||||||| Sbjct 866522 GGCAGAACAGCGTCCACTGGCCGTTGGACTCAACACGCTTCATG 866565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505865621840