Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-30 seq35 114 2e-20 >seq1 Length=2640167 Score = 149 bits (164), Expect = 1e-30 Identities = 431/658 (66%), Gaps = 9/658 (1%) Strand=Plus/Minus Query 159825 CCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCG 159883 ||| ||| || ||||| || || | ||||| ||||| || ||| | ||| |||| || Sbjct 599458 CCGTCAGGAATTCCTTTTCGATTGCAACCGCCTCGGTGACGATCGCCTGGACGACGTCCG 599399 Query 159884 TACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 | ||| | | | | ||||| ||||| |||||||||||||||| ||||| Sbjct 599398 GATGT-GGCCTCCTCTTGAGGTGGTG---AAACAAGAGGCACGCAAAGTCGGTGTGCATG 599343 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 |||||||| | ||||| ||| || || | | ||||||| ||||||| ||| ||| Sbjct 599342 CCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTGAGGCCGGGCATGAGCCCCCGCTTC 599283 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 |||||||| || || | ||||||| || || || || || || || || |||||| Sbjct 599282 TTGAGCCAGAATATTGACGCAAAACTTCCCGAGAAGAATATTCCTTCGACCGCAGCAAAC 599223 Query 160064 GCCACGAGCCTCTCACCAAAAGAGG--CGTTGGTGTCATGGGTCCACCTTTTGGCCCATT 160121 || || ||||| || || || || | || | |||| | |||| | |||||| | Sbjct 599222 GCGACAAGCCTTTCGCCGAATGATGATCGCT--TGTCTGAGATCCAGCGCAGGGCCCAGT 599165 Query 160122 CAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCT 160181 | |||||||| ||||||||| ||| ||| | |||| |||| || |||| | Sbjct 599164 CGGCCTTCTTCTTGATGCACGGGATGGTCTCTATCGCGTCGAACAGAAACTCGCGCTCTT 599105 Query 160182 TCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGA 160241 |||||||| || |||| || || || | || | || | || || | Sbjct 599104 GAGGGTCCTTGATGTAGGTGTCAATTAGGAGGGAATATGTCTCCGAATGTATGTTCTCCA 599045 Query 160242 TGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACC 160301 | ||||| ||| |||||| | || || | ||| ||||| | || ||| | Sbjct 599044 TCATTATCTGGAAGCCGTAGAAGCAACGAGCTTCTGCAGCCTGTACCTCGTTTGAGAAGC 598985 Query 160302 TTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAG 160361 || | | || || | || || | ||||||| || || ||||| || | ||||| | Sbjct 598984 GTTCAACGAGGTTCTCGTTTACAATGCCGTCGGACGCGGCGAAGAATGCAAGGACGTGGG 598925 Query 160362 AGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCCA 160421 |||||||| | | |||||| | | ||||| | | | ||||| | | ||| || ||| Sbjct 598924 AGATGAAACGGCGCTCGTCCTGGGTGAGTTTGTCGTTCCAGTCCATGAGGTCATGCCCCA 598865 Query 160422 AATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 || | |||||| || |||| | |||| || |||||||||| |||||| Sbjct 598864 GGTCCAGCTCTTCTGCTGTCCAGAACGAGGCCTCTGCTTTTTTGTACATCTGCCAGAT 598807 >seq35 Length=923662 Score = 114 bits (126), Expect = 2e-20 Identities = 164/226 (73%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897 ||| ||| || || ||||| ||||| | | | || || | | | || |||||||||| Sbjct 865271 TCTGGTCGACGGTAAACTGGATGGCCTGCGCCGCGGGGCGTGTACGGAGGTAGTACATGC 865330 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGTTG 203956 ||||||| |||||||||| ||| ||||| | ||||||| | ||| | || | ||| | Sbjct 865331 CGGTCTTGAGGCCCTTCTTCCAACCGTAGAAGTGCATGCTCGTCAGCTGGCCGATCGTCG 865390 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 || || | || ||| | ||||| |||||| ||| |||| || ||||| || ||||| Sbjct 865391 GGCTCTG-CAGGTGCACGTTCAAGCTCTGGCTCTGGCAGATG-AACGCGCCACGGTCTGC 865448 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||| | | || | |||||||||| |||||||| || |||||| Sbjct 865449 GGCGAGGTCGAGGACCTTCTTCTGCGAGATCTCCCAGACAGTCTTG 865494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153470537440