Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 318 6e-82 seq120 140 3e-28 seq98 129 6e-25 seq79 82.4 8e-11 >seq1 Length=2640167 Score = 318 bits (352), Expect = 6e-82 Identities = 403/552 (73%), Gaps = 9/552 (2%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| || |||||| |||| ||||||||||||| ||||| ||||| ||| || | Sbjct 596519 GCAGGCGAAGTCGGTGTGCATGCCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAG 596578 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 ||||||||||| || || || |||||||| || |||| ||||| || || ||||| Sbjct 596579 ACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAGAA 596638 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073 || ||||||||||| ||||| || || |||||||| |||| | | || ||| | Sbjct 596639 GATACCCTCGACGGCGGCGAACGCGACAAGGCGCTCAGCGAAGGAAGATTTCTTGTCAGA 596698 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133 ||||||||| || ||||| |||||||| | || | ||| || || || |||||||||| Sbjct 596699 GATCCAGCGGAGGGCCCAATCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTC 596758 Query 133134 CAACAAACGGAGTTT---CTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATA 133190 |||| || | | || | || | | ||| ||||| ||||| || || Sbjct 596759 GAACA---GGTGCTCGCGCTGCTTCGGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTA 596815 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 | | || ||||| | ||||||||| ||| || |||||||| ||||| || ||||| | Sbjct 596816 CGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGC 596875 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 |||||||| || | |||||||||||| || ||||||||||| || |||||| || Sbjct 596876 GACCTGCACCTCGTTGCTGAAACGCTCGACGAGGTTTTCGTTGACAATACCGTCGGACGC 596935 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCT---C 133367 |||||| ||||| || || ||| |||||| | |||||||||||||| | || | Sbjct 596936 GGCGAAGAAGGCGAGGACATGCGAGATGAAGTATCGCTCGTTGTCGTTGAGACGGTTGGT 596995 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| | |||||||| ||||||| |||||| ||||||| ||||| |||||||| Sbjct 596996 CCAGTCGTGAAGATCCTTGGAGAGGTCCATCTCCTCAGCGGTCCAGAACGAGGCCTCGGC 597055 Query 133428 TTTTTTGTACAT 133439 || |||||||| Sbjct 597056 CTTCTTGTACAT 597067 Score = 250 bits (276), Expect = 2e-61 Identities = 396/562 (70%), Gaps = 13/562 (2%) Strand=Plus/Minus Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945 |||| | ||| ||||||||| |||| ||||||||| ||| ||||| || || | Sbjct 599372 AACAAGAGGCACGCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATGAGCTCATTCGAG 599313 Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005 || || | |||||||||||| || || || |||||||| ||||| | || ||||| ||| Sbjct 599312 AAGGTGAGGCCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCAAAACTTCCC 599253 Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065 || ||||| | || ||||| || || || || || || | |||||||| | | | Sbjct 599252 GAGAAGAATATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAATGATGATCGC 599193 Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 ||| | |||||||||||| ||||| |||||||| | |||| |||||| || || || Sbjct 599192 TTGTCTGAGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCT 599133 Query 133126 ATGGCGTTCAAC--AAAC-GGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGA 133180 || |||| ||| |||| | | ||||| |||| | | ||||||||| || | Sbjct 599132 ATCGCGTCGAACAGAAACTCGCG---CTCTT--GAGGGTCCTTGATGTAGGTGTCAATTA 599078 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 || ||||| | ||||| |||| ||||||||| || || |||||||| ||||| | Sbjct 599077 GGAGGGAATATGTCTCCGAATGTATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAAC 599018 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 | || || | |||| || || | | ||| || || || || || ||||| || |||| Sbjct 599017 GAGCTTCTGCAGCCTGTACCTCGTTTGAGAAGCGTTCAACGAGGTTCTCGTTTACAATGC 598958 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360 ||||| |||||||| || || || ||||| ||||||| ||||||||| | | | | Sbjct 598957 CGTCGGACGCGGCGAAGAATGCAAGGACGTGGGAGATGAAACGGCGCTCGTCCTGGGTGA 598898 Query 133361 ---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACG 133417 | | |||||| ||| | |||||||| ||| || | ||||| |||| Sbjct 598897 GTTTGTCGTTCCAGTCCATGAGGTCATGCCCCAGGTCCAGCTCTTCTGCTGTCCAGAACG 598838 Query 133418 ACGCCTCGGCTTTTTTGTACAT 133439 | ||||| |||||||||||||| Sbjct 598837 AGGCCTCTGCTTTTTTGTACAT 598816 >seq120 Length=2004100 Score = 140 bits (154), Expect = 3e-28 Identities = 161/213 (76%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| || || ||||||||||| ||||||||| |||| |||||| || | Sbjct 1879942 ATGCAGATATTCGTGAAGACTCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 1879883 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 1879882 GACACTATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCAGACCA 1879824 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || ||||| ||||| || || | ||||||||| ||| ||||| Sbjct 1879823 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGATTACAA 1879764 Query 38423 CATCCAAAAGGAAGCGACGCTGCA-TTTGGTGC 38454 |||||| ||||| | || || || ||||||| Sbjct 1879763 CATCCAGAAGGAGTCCACCCTCCACCTTGGTGC 1879731 Score = 131 bits (144), Expect = 2e-25 Identities = 163/218 (75%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || |||||||| ||||| || || ||| |||| || ||| | || Sbjct 1878874 ATGCAAATCTTTGTCAAGACGCTCACCGGCAAGACGATTACCCTCGAGGTTGAGTCTTCC 1878815 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||| |||| ||||| || || || || ||||||| Sbjct 1878814 GACACGATCGACAACG-TCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCA 1878756 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| || || || |||| ||| |||||| ||||||||| Sbjct 1878755 GCAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGGCGTACCCTCTCCGACTACAA 1878696 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||| ||||| || | ||||| ||| Sbjct 1878695 CATCCAGAAGGAGAGC-ACGCTTCACCTCGTGCTTCGT 1878659 Score = 111 bits (122), Expect = 2e-19 Identities = 142/192 (74%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || ||||| |||| |||||| | | Sbjct 1879156 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCTTCG 1879097 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 1879096 GATACCATTGACAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 1879038 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| || || || |||||||| |||| ||||| || |||||||| Sbjct 1879037 GCAGCGCCTGATTTT-GCTGGTAAGCAGCTGGAGGACGGTCGCACTCTTTCGGACTACAA 1878979 Query 38423 CATCCAAAAGGA 38434 ||| || ||||| Sbjct 1878978 CATTCAGAAGGA 1878967 >seq98 Length=2497588 Score = 129 bits (142), Expect = 6e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || ||||||||||| || |||||| | || |||||| | | Sbjct 2387746 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTTGAAGTCGAGTCATC 2387805 Query 38303 CGACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | || | || |||| ||||| || || |||||| | |||| Sbjct 2387806 GGACACCATTGACAACG-TGAAGGCGAAGATCCAAGACAAGGAAGGCATTCCCCCAGACC 2387864 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || ||||| | ||||||||| ||||| || || | ||||| ||| |||||| | Sbjct 2387865 AACAACGCCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTATA 2387924 Query 38422 ACATCCAAAAGGA 38434 ||||||| ||||| Sbjct 2387925 ACATCCAGAAGGA 2387937 Score = 118 bits (130), Expect = 1e-21 Identities = 160/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || |||||| | | Sbjct 2388028 ATGCAGATCTTTGTCAAGACACTTACCGGCAAGACCATCACCTTGGAGGTCGAGTCGTCG 2388087 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 || | | || |||| | || | || |||| || || ||||| || |||||| || | Sbjct 2388088 GATACGATTGACAACG-TGAAGGCGAAGATCCAGGATAAGGAGGGCAT-CCCGCCAGATC 2388145 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || ||||| | ||| ||||| ||| |||| |||| |||||||| |||||||| Sbjct 2388146 AACAACGCCTCATCTTCGCTGGCAAGCAGTTGGAGGACGGACGCACCCTATCCGACTACA 2388205 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | ||||| ||| | || || ||| Sbjct 2388206 ACATCCAGAAGGAGTCCACGCTTCATCTCGTTCTTCGT 2388243 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||| || | || |||||| | || Sbjct 2388256 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTGGAGGTCGAGTCGTCC 2388315 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| ||||| || || | || || Sbjct 2388316 GACACTATCGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCACCTGATCA 2388374 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| ||||| ||||| || |||| |||||||| || ||||| Sbjct 2388375 ACAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGATTACAA 2388434 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 |||||| ||||| ||||||| || Sbjct 2388435 CATCCAGAAGGAGTCGACGCTCCA 2388458 >seq79 Length=745021 Score = 82.4 bits (90), Expect = 8e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 || ||| | |||||||| || || || | ||| ||||| ||||| || || | |||||| Sbjct 401348 ATCCCCCCAGACCAACAACGACTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACC 401289 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || | ||||||||||||||| ||||| | || || || ||||| || || Sbjct 401288 CTGAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTCCTCCG 401239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171712124160