Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq109 219 5e-52 seq101 100 4e-16 >seq109 Length=2399336 Score = 219 bits (242), Expect = 5e-52 Identities = 262/356 (74%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||| | ||| || || || || || || ||||| || |||||||| Sbjct 1648857 ATCGAAGTCCTCACCACCAAGGTGAGTGTCACCAGCAGTGGCCTTGACCTCGAAGATACC 1648916 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || ||| | | | ||| ||||| || ||||| ||||| || || || ||||| || Sbjct 1648917 CTCCTCGATGGTCAGAAGCGACACATCGAAGGTACCTCCACCGAGATCGAAGATGAGGAC 1648976 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| ||| | | | ||||| ||||||||||||||||| |||||||| || || || Sbjct 1648977 GTTGCGCTCGCCCTGGGTCTTCTTGTCGAGACCGTACGCGATGGCCGCCGCGGTGGGCTC 1649036 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| || ||| || |||| || || ||||||| |||||||| || || Sbjct 1649037 GTTGATGATACGGAGGACGTTGAGACCAGAGATGGTACCCGCATCCTTCGTCGCCTGACG 1649096 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| ||||| |||||||| ||||| || || || |||| ||||| ||| || || Sbjct 1649097 CTGCGAGTCGTTGAAGTAGGCAGGGACAGTGACAACGGCGTTGGTGACGGTCTGGCCAAG 1649156 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 |||| || ||| | || ||||| ||| || ||||| || || ||||| |||| Sbjct 1649157 GTACGCCTCGGCGGTCTCCTTCATCTTGAGGAGGACCATGGACGAGATCTCCTCAG 1649212 Score = 140 bits (154), Expect = 4e-28 Identities = 162/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 7898 TTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCA 7957 ||||| ||| | ||||||| |||| ||||| | ||||| |||||||| || || Sbjct 1649356 TTCATGTCGGCCTGGACCTCGGGGTCGTCGAACTTGCGACCGATGAGACGCTTCGCGTCG 1649415 Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 || || ||||| | ||||||||| || ||||||||||| ||||| ||||| | || Sbjct 1649416 AAGACGGTGTTGTGGGGGTTCATCGCGACCTGGTTCTTCGCGGCGTCGCCGATCAACCGC 1649475 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077 || ||| || | || | |||||| || ||||| || || || || |||||||| || Sbjct 1649476 TC---ATTGTCGGAGAAGGAGACGTATGAGGGGGTGGTGCGGTTACCCTGGTCGTTGGCG 1649532 Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || ||||| || |||||||| |||||||| ||||| || Sbjct 1649533 ATGATTTCGACCCGGTCGTTCTGCCAGACACCGACACA 1649570 Score = 134 bits (148), Expect = 2e-26 Identities = 190/267 (71%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||||||||| || || || ||||| || ||||| | |||| ||| Sbjct 2032011 ATCGAAGTCCTCACCACCCAAGTGGGTGTCACCAGCGGTAGCCTTGACGGCGAAGACACC 2031952 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || ||||| | | || ||||| || |||||||| || || || || || || || Sbjct 2031951 ACCAGTGATGTTGAGGAGGGAGACATCGAAAGTACCACCGCCAAGATCGAAGATCAGGAC 2031892 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | | || | | |||| |||||||||||||||||||| ||||| || || || Sbjct 2031891 GTGCTTCTCCTGCGCGGACTTCTGGTCGAGACCGTACGCGATAGCGGCCGCAGTGGGCTC 2031832 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 ||||| ||||| || | || ||||| || | | ||||| || || || | || Sbjct 2031831 GTTAATGATACGGAGGACCTCGAGACCAGCGATGGAACCAGCATCCTTGGTGGCGAGACG 2031772 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || || ||||| ||||| || ||||| Sbjct 2031771 CTGGGAGTCGTTGAAGTAAGCGGGGAC 2031745 Score = 82.4 bits (90), Expect = 1e-10 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| |||||||| || || || || ||||| |||||||||||||| | ||||||||| Sbjct 2031417 CCGATGAGACGCTTGGCGTCGAAGACCGTGTTCTTGGGGTTCATGGCAGCCTGGTTCTTC 2031358 Query 7997 GCCGCGTCCCCGATAAGACGTTC 8019 || || || || |||||||| || Sbjct 2031357 GCGGCATCACCAATAAGACGCTC 2031335 >seq101 Length=287259 Score = 100 bits (110), Expect = 4e-16 Identities = 176/256 (69%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| || ||| || |||| || Sbjct 74490 TCAAAGTCCTCACCACCGAGGTGAGTGTCACCAGCGGTAGCCAAGACCTCGAAGACGCCG 74431 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | || |||||||| || ||||||||||| || || ||| || | Sbjct 74430 TCGTCGATCGAGAGCAGGGAAACATCGAAGGTACCACCACCGAGATCGTAAACGATAATC 74371 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || ||| || | ||||| || |||||||| |||||||| || || || || || Sbjct 74370 TGCGACTCGCCGCC---CTTCTTGTCAAGACCGTAGGCGATAGCGGCAGCGGTGGGCTCG 74314 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || |||||||| | || || ||||| || | ||||| || ||||| || || Sbjct 74313 TTGATGATACGAAGCACCTGGAGACCGGCAATGGTACCGGCATCCTTGGTCGCCTGACGC 74254 Query 7697 TGCGAATCGTTAAAGT 7712 || | ||||| |||| Sbjct 74253 TGAGCGTCGTTGAAGT 74238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131418586160