Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 134 2e-26 seq98 105 8e-18 seq68 95.1 2e-14 >seq1 Length=2640167 Score = 134 bits (148), Expect = 2e-26 Identities = 172/233 (74%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTA 102144 |||| || || || |||||| | || | || || ||| | ||||| || |||||||| Sbjct 596769 AGCACCTGTTCGACGCCATCGAGACCATCCCCTGCATTAAGAAGAAGGCCGATTGGGCCC 596710 Query 102145 TGAAGTGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 102201 | ||| | ||| | || || |||||| |||||||| || |||| || || Sbjct 596709 TCCGCTGGATCTCTGACAAGAAATC---TTCCTTCGCTGAGCGCCTTGTCGCGTTCGCCG 596653 Query 102202 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGA 102260 || ||||||||||||||||||||||||||| ||| | || | |||||||||||||| Sbjct 596652 CCGTCGAGGGTATCTTCTTCTCTGGTTCCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGT 596594 Query 102261 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 || |||||||| |||||| |||||| |||||||| ||| | |||||||| Sbjct 596593 GGACTCATGCCCGGTCTCACCTTCTCGAACGAGCTCATCAGCAGGGACGAGGG 596541 >seq98 Length=2497588 Score = 105 bits (116), Expect = 8e-18 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGA 16113 ||| || | |||||| || ||||| | |||||| ||||| || || ||| | || | Sbjct 1730164 CTTACCAATGGCATCGATTTCATCCACGAAGACAATGCACGGCGCGTTCTTCTTG-GCCA 1730106 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 ||||||| ||||| || || || ||| ||||| || ||||| || || || | | Sbjct 1730105 TGGCAAAGAGGTCCCGGACGCGAGAGGAGCCGACACCGACGAACATTTCGACGAACTCGG 1730046 Query 16174 CGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | |||| || | | |||||||||||| | ||| ||||| ||||| |||||| || Sbjct 1730045 AGCCGGA-CACGGAAAAGAAGGGGACATTGGCTTCGCCCGCGGTGGCTTTGGCGAGGAGG 1729987 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||||||| ||||| || ||| | || | |||||| || |||||||| || || Sbjct 1729986 GTCTTACCAGTACCGGGAGGACCGGAAAGAATGGCACCGCGAGGAATCTTAGCACC 1729931 >seq68 Length=814117 Score = 95.1 bits (104), Expect = 2e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 13593 CGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAAC 13652 ||| |||| |||||||| |||| ||| ||| || |||||| ||| | || || | | Sbjct 243444 CGCTTCTACCAAGCCTCGACATCTGAGCTGTACGGAAAGGTTGTCGAGACGCCGCAGAGC 243503 Query 13653 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 13712 ||| ||| ||||||||||| |||||| ||||| ||| | ||| | || | ||| Sbjct 243504 GAGACGACGCCCTTCTACCCGCGCTCGCCGTACGGTGTCGCGAAGCTGTACGCGTACTGG 243563 Query 13713 CTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAAC 13772 || || ||||||||| | ||||| ||| || ||| ||| |||||||||||| Sbjct 243564 ATCACGGTCAACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGCATCCTCTTCAAC 243623 Query 13773 CATGAATCACCGAGACGAGG 13792 || || || ||| | || || Sbjct 243624 CACGAGTCGCCGCGGCGCGG 243643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741049885280