Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 seq109 86.0 7e-12 seq159 82.4 9e-11 seq119 82.4 9e-11 seq97 82.4 9e-11 seq87 82.4 9e-11 >seq1 Length=2640167 Score = 107 bits (118), Expect = 2e-18 Identities = 350/530 (66%), Gaps = 24/530 (5%) Strand=Plus/Plus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 ||||||||| || |||| || || ||||||||||| | ||||| ||||| ||||| Sbjct 596555 GATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGAT 596614 Query 119588 GG-CACAAA--AACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACG 119644 || | | || || ||||| |||||||| ||||| || |||||| |||| || || Sbjct 596615 GGACGCGAAGGAA---CCAGAGAAGAAGATACCCTCGACGGCGGCGAACGCGACAAGGCG 596671 Query 119645 CTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGCCCAGTTGGCCTTACGCT 119700 |||||| |||| || |||||| || ||| ||| ||||| | |||||| || Sbjct 596672 CTCAGC-GAAGGAAGATTTCTTGTCAGAGATCCAGCGGAGGGCCCAATCGGCCTTCTTCT 596730 Query 119701 CTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCT---TCT-TTTCAGCACCATCC 119756 |||||||||| || | |||||| ||||| || |||| || ||| | || Sbjct 596731 TAATGCAGGGGATGGTCTCGATGGCGTCGAACAGGTGCTCGCGCTGCTTCGG----GTCT 596786 Query 119757 TTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCAT-TTCATTGTGTGA 119815 || || || | |||||||| ||||| ||||| || | | | ||| || Sbjct 596787 TTGATGTACGTGTCAATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCTCCATCATG-AT 596845 Query 119816 CTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGCAAAATTGTTGTT 119875 ||| || | || || |||| || || | | ||||| |||| ||| | | Sbjct 596846 CTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGACCTGCACCTCGTTGCTGAAACGCTCGAC 596905 Query 119876 GATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGATGTACTTTATGAA 119935 || ||||| ||||| || ||||| | |||||||| || | || | | ||||| Sbjct 596906 GAGGTTTTCGTTGACAATACCGTCGGACGCGGCGAAGAAGGCGAGGACATGCGAGATGAA 596965 Query 119936 TTTCTGTTCATTATCGTTGAG--TGTT-TTCCAGTCGTCCATATCTTTAGACAAGTCCAC 119992 | | || || |||||||| ||| ||||||||| | ||| || || | ||||| Sbjct 596966 GTATCGCTCGTTGTCGTTGAGACGGTTGGTCCAGTCGTGAAGATCCTTGGAGAGGTCCAT 597025 Query 119993 CTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAGTTCCCAAA 120042 ||| ||||| |||||| || || ||||| || || | || ||||| Sbjct 597026 CTCCTCAGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACATTTGCCAAA 597075 >seq109 Length=2399336 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/75 (87%), Gaps = 4/75 (5%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 582332 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 582391 Query 136775 TTGGGAACAGCTTTT 136789 |||| |||||||| Sbjct 582392 TTGG--CCAGCTTTT 582404 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 497319 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 497378 Query 136775 TTGG 136778 |||| Sbjct 497379 TTGG 497382 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/81 (84%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 568445 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 568386 Query 136775 TTGGGAACAGCTTTTAGATAT 136795 |||| || |||| ||||| Sbjct 568385 TTGG--CCACTTTTTTGATAT 568367 >seq159 Length=43342 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 40187 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 40246 Query 136775 TTGG 136778 |||| Sbjct 40247 TTGG 40250 >seq119 Length=122805 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 27219 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 27278 Query 136775 TTGG 136778 |||| Sbjct 27279 TTGG 27282 >seq97 Length=355314 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 342158 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 342099 Query 136775 TTGG 136778 |||| Sbjct 342098 TTGG 342095 >seq87 Length=2533944 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 2102567 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 2102626 Query 136775 TTGG 136778 |||| Sbjct 2102627 TTGG 2102630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974718977200