Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq98 102 1e-16 seq1 98.7 1e-15 seq68 96.9 4e-15 >seq98 Length=2497588 Score = 102 bits (112), Expect = 1e-16 Identities = 219/322 (68%), Gaps = 4/322 (1%) Strand=Plus/Minus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421 ||| || | |||||| || ||||| | ||||||||| || || || | ||| || Sbjct 1730164 CTTACCAATGGCATCGATTTCATCCACGAAGACAATGCACGGCGCGTTCTTCTTGGCCAT 1730105 Query 9422 TTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9481 ||||||| || || || | || ||| ||||| || ||||| || || || | | Sbjct 1730104 GGCAAAGAGGTCCCGGACGCGAGAGGAGCCGACACCGACGAACATTTCGACGAACTCGGA 1730045 Query 9482 GGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9540 | |||| || | | |||||||||||| | ||| ||||| ||||| |||||| || | Sbjct 1730044 GCCGGA-CACGGAAAAGAAGGGGACATTGGCTTCGCCCGCGGTGGCTTTGGCGAGGAGGG 1729986 Query 9541 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC-ACTT 9599 ||||||| ||||| || ||| | || | |||||| || |||||||| || || | || Sbjct 1729985 TCTTACCAGTACCGGGAGGACCGGAAAGAATGGCACCGCGAGGAATCTTAGCACCGAGTT 1729926 Query 9600 CCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 9659 | ||| | |||| | |||||| || |||| ||| | || || ||||| Sbjct 1729925 TC-TCGTAGCGAGCAGGCTCCTTGAGGAATGAGACAAACTCCATGATCTCTTCCTTGGCT 1729867 Query 9660 GCGTCAATCCCCTCAACATCGG 9681 |||| || || | ||||||| Sbjct 1729866 TCGTCCATTCCAGCGACATCGG 1729845 >seq1 Length=2640167 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/218 (71%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 117307 ATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCTTCAACCAATAAATA 117366 || || || || |||||| || || |||||||| || |||||||| | ||| | || Sbjct 596556 ATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATG 596615 Query 117367 G-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACGCAAAAAGGCGCTC 117425 | ||| ||| || || ||||||||||||||||| || || ||||| | ||||||||| Sbjct 596616 GACGC-GAAGGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAACGCGACAAGGCGCTC 596674 Query 117426 GGCGAAGGAGCGAGACTTTGTGTCA---AACCATTTCATTGCCCATTTCGCCTTCTTCTC 117482 |||||||| ||| || ||||| | ||| | ||||| | |||||||||| Sbjct 596675 AGCGAAGGA---AGATTTCTTGTCAGAGATCCAGCGGAGGGCCCAATCGGCCTTCTTCTT 596731 Query 117483 AATACATGGTACAGTTTGGATGGCTTCAAATAACTGCT 117520 ||| || || | || | |||||| || || | |||| Sbjct 596732 AATGCAGGGGATGGTCTCGATGGCGTCGAACAGGTGCT 596769 >seq68 Length=814117 Score = 96.9 bits (106), Expect = 4e-15 Identities = 144/203 (71%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 6900 CGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAAC 6959 ||| |||| |||||||| | || ||| ||| || |||||| ||| | || || | | Sbjct 243444 CGCTTCTACCAAGCCTCGACATCTGAGCTGTACGGAAAGGTTGTCGAGACGCCGCAGAGC 243503 Query 6960 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7019 ||| ||| ||||||||||| |||||| ||||| ||| | ||| | || | ||| Sbjct 243504 GAGACGACGCCCTTCTACCCGCGCTCGCCGTACGGTGTCGCGAAGCTGTACGCGTACTGG 243563 Query 7020 CTC---GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTC 7076 || ||| || ||||||||| | ||||| ||| |||||| ||| ||||||||| Sbjct 243564 ATCACGGTC---AACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGCATCCTCTTC 243620 Query 7077 AACCATGAATCACCGAGACGAGG 7099 ||||| || || ||| | || || Sbjct 243621 AACCACGAGTCGCCGCGGCGCGG 243643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979516791760