Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq98 183 7e-41 seq120 170 4e-37 seq79 93.3 9e-14 seq46 84.2 5e-11 >seq98 Length=2497588 Score = 183 bits (202), Expect = 7e-41 Identities = 166/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||||||||| ||||| || || || || || |||| ||||| | ||||| |||| Sbjct 2387954 CAAGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGA 2387895 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| || |||||||||||||| ||||||||||| |||||||| | Sbjct 2387894 GCTGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGA 2387835 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| ||||| |||||||||||||| || ||||||||||| | |||||| | Sbjct 2387834 TCTTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGC 2387775 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || | || || ||||| | |||||| Sbjct 2387774 CCGTGAGGGTCTTGACGAAGATCTGCATT 2387746 Score = 116 bits (128), Expect = 8e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || || || |||||||| | || || | || || ||| Sbjct 2388464 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCG 2388405 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || ||||| || || || ||||| || ||||| ||| Sbjct 2388404 AGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGA 2388345 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || ||||| || || || || || |||| ||||| Sbjct 2388344 ATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTG 2388285 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 2388284 CCGGTAAGGGTCTTGACAAAGATCTGCAT 2388256 >seq120 Length=2004100 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || |||||||||||||| | ||| || | ||||||||| Sbjct 1879176 ACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCTTCG 1879235 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || |||||||||||||| || ||||| ||| Sbjct 1879236 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGA 1879295 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || |||||||| || || |||||||| | |||||| Sbjct 1879296 ATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTCTTA 1879355 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 1879356 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 152 bits (168), Expect = 1e-31 Identities = 158/206 (77%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 |||||||| || ||||| || ||||| ||||| || | |||||| | || || || ||| Sbjct 1878952 AGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGC 1879011 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 |||||||| || || || || || || |||||||| |||||||| || |||||||| || Sbjct 1879012 TGCTTACCAGC-AAAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATC 1879070 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||||||||| |||||||| |||||| || || || || || | |||||| || Sbjct 1879071 TTCGCCTTGACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCG 1879130 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || || ||||| | |||||| Sbjct 1879131 GTCAGCGTCTTCACGAAGATTTGCAT 1879156 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 ||||| |||||||| || || ||||| |||||||||| | || | || || |||||| Sbjct 1879457 AGGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGC 1879516 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || || || || || || || ||||| |||||||||||||| ||||| || || Sbjct 1879517 TGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATC 1879576 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||| || || ||||||||||| ||| ||| || || || || | ||||| || Sbjct 1879577 TTGGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCC 1879636 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || || || || | ||||| Sbjct 1879637 GTCAGGGTCTTGACAAAGATCTGCAT 1879662 >seq79 Length=745021 Score = 93.3 bits (102), Expect = 9e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| ||| || || | ||||| |||||||| Sbjct 401250 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTG 401309 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||| || |||||||| ||||||||||||||||| || |||| Sbjct 401310 CTTGCCGGCGAAGATCAGTCGTTGTTGGTCTGGGGGGATGC 401350 >seq46 Length=919979 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || ||||| ||||| || | ||||| | || || ||| Sbjct 474133 ACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCG 474074 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || |||||||| || || || |||||||| || |||| Sbjct 474073 AGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGC 474028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479126549458