Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 102 9e-17 >seq1 Length=2640167 Score = 102 bits (112), Expect = 9e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 ||||||||||| || || | ||||| || || || | || ||||| || || | || Sbjct 599342 CCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTGAGGCCGGGCATGAGCCCCCGCTTC 599283 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || | ||||||||| || ||||| ||| || |||||||| ||||| || || ||||| Sbjct 599282 TTGAGCCAGAATATTGACGCAAAACTTCCCGAGAAGAATATTCCTTCGACCGCAGCAAAC 599223 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA-ATCCATTTCAGTGCCCAATC 19160 || || || ||||| || || | ||| | | ||| ||||| ||| ||||| || Sbjct 599222 GCGACAAGCCTTTCGCC-GAATGATGATCGCTTGTCTGAGATCCAGCGCAGGGCCCAGTC 599164 Query 19161 AGCCTTCTTTTTTACACATGGCATTGTCTCTAT 19193 |||||||| || | || || || |||||||| Sbjct 599163 GGCCTTCTTCTTGATGCACGGGATGGTCTCTAT 599131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107577413360