Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq120 107 2e-18 seq98 100 2e-16 >seq120 Length=2004100 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || |||||||||| || || | | |||| || | ||| Sbjct 1879740 TGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGC 1879799 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | |||||| || || || |||||||| || || || || || || Sbjct 1879800 TTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTG 1879859 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||||||| | || || || || |||| || ||||| || Sbjct 1879860 GCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTG 1879919 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCG 101478 | ||| || || |||||||||||| | |||| Sbjct 1879920 AGAGTCTTCACGAATATCTGCATGCTGTCGCG 1879951 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || |||||||| || || || ||||||||||| | | || | | |||| || | ||| Sbjct 1879182 TGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCTTCGAGCTGC 1879241 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || |||| ||||| ||||| || |||||||| || || || ||||| || Sbjct 1879242 TTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGAATCTTG 1879301 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| |||| || || ||||| |||| ||| || || || Sbjct 1879302 GCCTTGACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTCTTACCCGTG 1879361 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 1879362 AGGGTCTTGACGAAGATCTGCAT 1879384 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || ||||| || || || |||||||||| | || | | | || || | ||| Sbjct 1879460 TGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTGC 1879519 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | |||||| || || || ||||||||||| || || || || || Sbjct 1879520 TTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTG 1879579 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | ||| || || || |||| || ||||| || Sbjct 1879580 GCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTC 1879639 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 1879640 AGGGTCTTGACAAAGATCTGCATG 1879663 Score = 87.8 bits (96), Expect = 1e-12 Identities = 142/203 (70%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || || ||||| || | | ||| | | || |||| ||| Sbjct 1878955 TGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGC 1879014 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| |||| ||||| || || || |||||||| || || ||||| || || Sbjct 1879015 TTACCAGCAAA-ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTC 1879073 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | || || || | || || || || |||| ||| |||||||| Sbjct 1879074 GCCTTGACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTC 1879133 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || || ||||| Sbjct 1879134 AGCGTCTTCACGAAGATTTGCAT 1879156 >seq98 Length=2497588 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| ||||| || || || || || || |||| || ||| | | |||| || | ||| Sbjct 2387949 TGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGC 2387890 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | || ||||| || || ||||||||||| || ||||| || || Sbjct 2387889 TTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTC 2387830 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| || | || |||||||| |||| ||| ||||| || Sbjct 2387829 GCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCCGTG 2387770 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 2387769 AGGGTCTTGACGAAGATCTGCAT 2387747 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || || || || || || |||||||| | | || | | || || | ||| Sbjct 2388458 TGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCGAGCTGC 2388399 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || ||||| ||||||||||| || || ||||| || || || ||||| || Sbjct 2388398 TTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGAATCTTC 2388339 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | |||||| |||| || || || || || | || |||||||| Sbjct 2388338 GCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTGCCGGTA 2388279 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | || || ||||| ||||||||| | |||| ||| Sbjct 2388278 AGGGTCTTGACAAAGATCTGCATGCCTCCGCGGAGA 2388243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277559642118