Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq98 100 2e-16 seq120 95.1 9e-15 >seq98 Length=2497588 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || || || |||||||| || || | ||| |||| || | |||| Sbjct 2388458 TGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCGAGCTGC 2388399 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || |||| ||||||||||| | || | |||||||||||| |||||| Sbjct 2388398 TTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGAATCTTC 2388339 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | || || |||| ||| ||||||| |||||| || || || || Sbjct 2388338 GCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTGCCGGTA 2388279 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || ||||| |||||||| Sbjct 2388278 AGGGTCTTGACAAAGATCTGCAT 2388256 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| |||||| ||| || || || || || || || || | || Sbjct 2388701 AGGCGAAGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAAAGGGTACGC 2388642 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| |||| ||||| || || | ||||| |||||| Sbjct 2388641 CCATCCTCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCC 2388582 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||||||||||| || Sbjct 2388581 TTGTCCTGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACCTCCAGAGTG 2388522 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||||||||| || || || ||||| ||||| Sbjct 2388521 ATGGTCTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| |||||| ||| || || || ||||| || ||||| | || |||| |||||||| Sbjct 2388231 ATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGTCCGTCCTCCAACTG 2388172 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || || || || || || |||||||| | || | ||||||||| || ||||| Sbjct 2388171 CTTGCCAGCGAAGATGAGGCGTTGTTGATCTGGCGGGATGCCCTCCTTATCCTGGATCTT 2388112 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | | || |||| ||| ||||||| || || || || || || Sbjct 2388111 CGCCTTCACGTTGTCAATCGTATCCGACGACTCGACCTCCAAGGTGATGGTCTTGCCGGT 2388052 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | || || ||||| |||||||| Sbjct 2388051 AAGTGTCTTGACAAAGATCTGCAT 2388028 >seq120 Length=2004100 Score = 95.1 bits (104), Expect = 9e-15 Identities = 137/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || ||||| ||||| || || ||| | ||| |||| |||| ||||||||| ||||| Sbjct 1878966 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCAAA 1879025 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||| ||||| || || | ||||| |||||||||||| ||||| || || Sbjct 1879026 -ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 1879084 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | ||| ||||| | ||| ||||| || || |||| || || || Sbjct 1879085 GTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTCAC 1879144 Query 48755 AAAAATCTGCAT 48766 || || ||||| Sbjct 1879145 GAAGATTTGCAT 1879156 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || |||||||||||||| || || | || | || || | |||||| ||||| || Sbjct 1879193 CTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 1879252 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||| ||||| ||||| | |||| |||||||||||| |||||| || || Sbjct 1879253 GATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 1879312 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || |||| ||| ||||| | || ||||| || ||||| | || || || Sbjct 1879313 GTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGAC 1879372 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 1879373 GAAGATCTGCAT 1879384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936792174202