Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 295 1e-74 seq35 111 3e-19 >seq1 Length=2640167 Score = 295 bits (326), Expect = 1e-74 Identities = 402/559 (72%), Gaps = 9/559 (2%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | |||||| ||||| |||||| ||| ||||||| |||||||||| |||| |||| Sbjct 596512 AGAGGAGGCAGGCGAAGTCGGTGTGCATGCCCTCGTCCCTGCTGATGAGCTCGTTCGAGA 596571 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || |||||| ||||||| || | || ||||||||||| || | |||||| || |||| Sbjct 596572 AGGTGAGACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCAG 596631 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| ||||| || || ||||||||| || | ||| |||| |||| |||| Sbjct 596632 AGAAGAAGATACCCTCGACGGCGGCGAACGCGACAAGGCGCTCAGCGAAGGAAGATTTCT 596691 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| ||||||||| || ||||| || ||||||||||| ||||| || || ||||| | Sbjct 596692 TGTCAGAGATCCAGCGGAGGGCCCAATCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGA 596751 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCT 48419 |||| ||| || | || || || | ||| | || || | ||||||| Sbjct 596752 TGGCGTCGAACAGGTGCTCGCGCTGCTTCGGGTCTTTGATGTACGTGTCAATGAGCAG-- 596809 Query 48420 TTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGG 48479 | |||| |||| ||||| | ||||| || ||||||||| ||||||||| | || Sbjct 596810 -GGAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGG 596868 Query 48480 CCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCAT 48539 ||||| |||||||| || || ||| | ||| | || || || ||||| || || | Sbjct 596869 CCTCAGCGACCTGCACCTCGTTGCTGAAACGCTCGACGAGGTTTTCGTTGACAATACCGT 596928 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAG 48599 | || || || |||||||| |||||||| | ||| | |||||||||| | ||||| Sbjct 596929 CGGACGCGGCGAAGAAGGCGAGGACATGCGAGATGAAGTATCGCTCGTTGTCGTTGAGAC 596988 Query 48600 CAT---TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 | ||||| | || | || ||| ||||||| || || | |||||||| || | Sbjct 596989 GGTTGGTCCAGTCGTGAAGATCCTTGGAGAGGTCCATCTCCTCAGCGGTCCAGAACGAGG 597048 Query 48657 CGAGTGCTTTTTTGTACAT 48675 | || || |||||||| Sbjct 597049 CCTCGGCCTTCTTGTACAT 597067 Score = 260 bits (288), Expect = 3e-64 Identities = 390/552 (71%), Gaps = 9/552 (2%) Strand=Plus/Minus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| |||||||| |||||| ||| ||||| | |||||||||| | || |||||| ||| Sbjct 599364 GCACGCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTGAG 599305 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || ||||||| ||||| || ||||||||||| |||| ||| ||| || |||||||| Sbjct 599304 GCCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCAAAACTTCCCGAGAAGAA 599245 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 || || || || || || |||||| ||||| || ||||| || | ||||||||| Sbjct 599244 TATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAATGATGATCGCTTGTCTGA 599185 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 ||||||| || |||||||| ||||||||||||||||| || || |||||||| || Sbjct 599184 GATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCTATCGCGTC 599125 Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTA 48426 ||| || || || ||| | |||| | ||||| | | || || | || Sbjct 599124 GAACAGAAACTCGCGCTCTTGAGGGTCCTTGATGTAGGTGTCAATTAGGAG---GGAATA 599068 Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486 |||| || || | ||||| || |||||||| ||||||||| | || || Sbjct 599067 TGTCTCCGAATGTATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGAGCTTCTGC 599008 Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGC 48546 |||| || || | ||||| | || | || ||||| || || || || || || || Sbjct 599007 AGCCTGTACCTCGTTTGAGAAGCGTTCAACGAGGTTCTCGTTTACAATGCCGTCGGACGC 598948 Query 48547 AGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCATT 48603 || ||||| |||||||| || | |||| ||||||||| |||||||| | || Sbjct 598947 GGCGAAGAATGCAAGGACGTGGGAGATGAAACGGCGCTCGTCCTGGGTGAGTTTGTCGTT 598888 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663 |||| || | ||| | |||||||||| ||||| | |||||||| || || ||| Sbjct 598887 CCAGTCCATGAGGTCATGCCCCAGGTCCAGCTCTTCTGCTGTCCAGAACGAGGCCTCTGC 598828 Query 48664 TTTTTTGTACAT 48675 |||||||||||| Sbjct 598827 TTTTTTGTACAT 598816 Score = 96.9 bits (106), Expect = 6e-15 Identities = 137/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 |||||| ||| | ||||| |||||||| ||||| |||| | |||||| | ||||| Sbjct 596180 GTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCAT 596239 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCAGG 47959 |||| |||||||||| | ||| || ||| | |||| || | | | ||||| Sbjct 596240 GAAGTCAAAGGGGTTGGTCGCGTTGTAGACCTTCTCGTCA--CCGAGCGCGACGAGCAGA 596297 Query 47960 TGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGAC 48019 | || |||||| |||||||||||| ||||||| | ||||||||| ||||| | Sbjct 596298 CGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTCGAGTTCATGCCAATGAGCGCG 596357 Query 48020 ACGGGCAAAGC 48030 ||||||| ||| Sbjct 596358 ACGGGCAGAGC 596368 >seq35 Length=923662 Score = 111 bits (122), Expect = 3e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 || ||||||||||| || ||||| | | |||||| |||||||| ||||||||| Sbjct 866240 GCAAGGTTGCAAACAGCGGTCTCCTCGGGTGAAGAGTACTCGATGATCTCCGTGCACAGG 866299 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614 || | ||||||||| |||||||| ||||| ||||| || ||||||||||||||| Sbjct 866300 TTTGACGACTTGATGGTGCCGAGGTTCTGCTGGTTAGACTTCGCATTGGCAGAATCCTTG 866359 Query 213615 TAGAGCATGTAGGG 213628 ||||||||| |||| Sbjct 866360 TAGAGCATGAAGGG 866373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530773916160