Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 214 3e-50 seq35 96.9 6e-15 >seq1 Length=2640167 Score = 214 bits (236), Expect = 3e-50 Identities = 391/567 (69%), Gaps = 7/567 (1%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| ||||||||| || ||||| || || Sbjct 597076 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCTGAGGAGATGGACCTC 597017 Query 25537 GCCAAGGACATGGACGGCTGGT---ACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || ||| | | |||||| | || || | Sbjct 597016 TCCAAGGATCTTCACGACTGGACCAACCGTCTCAACGACAACGAGCGATACTTCATCTCG 596957 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 | || | || ||||| || || || || ||||| || ||||| || || |||| | Sbjct 596956 CATGTCCTCGCCTTCTTCGCCGCGTCCGACGGTATTGTCAACGAAAACCTCGTCGAGCGT 596897 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| || || |||||| || |||||| || |||||||| |||||||| || Sbjct 596896 TTCAGCAACGAGGTGCAGGTCGCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 596837 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || || | ||||| ||| ||| || ||| | |||||||| | |||| || Sbjct 596836 GAGAACATCCACTCCGAGACGTACTCCCTGCTCATTGACACGTACATCAAAGACC-CGAA 596778 Query 25774 G-AGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 | || | || | ||||| | ||||||||| ||| ||| |||| |||| |||||| Sbjct 596777 GCAGCGCGAGCACCTGTTCGACGCCATCGAGACCATCCCCTGCATTAAGAAGAAGGCCGA 596718 Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||| | |||||| | ||| || | || | ||||| || || || || Sbjct 596717 TTGGGCCCTCCGCTGGATCTCTGACAAGAAATCTTCCTTCGCTGAGCGCCTTGTCGCGTT 596658 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 || || || ||||| ||||| ||| ||||| || ||| ||||||||||||||||| | Sbjct 596657 CGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCGTCCATCTTCTGGCTCAAGAA 596598 Query 25953 GAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 | | |||| ||||||||| || ||| || |||||||||||||||||||||||||| Sbjct 596597 GC-GTGGACTCATGCCCGGTCTCACCTTCTCGAACGAGCTCATCAGCAGGGACGAGGGCA 596539 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCT 26038 | |||| || || |||||||| |||| Sbjct 596538 TGCACACCGACTTCGCCTGCCTCCTCT 596512 Score = 136 bits (150), Expect = 7e-27 Identities = 375/568 (66%), Gaps = 19/568 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||| || || | ||| |||||| || |||||| | || ||| Sbjct 598807 ATCTGGCAGATGTACAAAAAAGCAGAGGCCTCGTTCTGGACAGCAGAAGAGCTGGACCTG 598866 Query 25537 GCCAAGGAC---ATGGACGGCTGGTACGCT---CTATCCAAAGACGAGCAGCATTTTCTC 25590 | | ||| |||||| ||| ||| || || | ||||||| | ||| || Sbjct 598867 GGGCATGACCTCATGGAC---TGGAACGACAAACTCACCCAGGACGAGCGCCGTTTCATC 598923 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 |||| | |||||||| || || || || || || || |||||||| || || Sbjct 598924 TCCCACGTCCTTGCATTCTTCGCCGCGTCCGACGGCATTGTAAACGAGAACCTCGTTGAA 598983 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | ||| | | || || ||| | || || || |||||||| |||||||| Sbjct 598984 CGCTTCTCAAACGAGGTACAGGCTGCAGAAGCTCGTTGCTTCTACGGCTTCCAGATAATG 599043 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 || || || | || || ||| ||| || || || || || ||||| | ||| Sbjct 599044 ATGGAGAACATACATTCGGAGACATATTCC---CTCCTAATTGACACCTACATCAAGGAC 599100 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 ||| | || ||||| | || || ||| ||| || ||||||||| |||| Sbjct 599101 CCTCAAGAGCGCGAGTTTCTGTTCGACGCGATAGAGACCATCCCGTGCATCAAGAAGAAG 599160 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTA--CGTTTGGCGAGCGGCTGG 25885 || |||||| || |||||| ||| || |||| | | || ||||| |||| | Sbjct 599161 GCCGACTGGGCCCTGCGCTGGATCT-CAGACA-AGCGATCATCATTCGGCGAAAGGCTTG 599218 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | || |||||||| || || || || || ||| || |||||| | || ||||||| Sbjct 599219 TCGCGTTTGCTGCGGTCGAAGGAATATTCTTCTCGGGAAGTTTTGCGTCAATATTCTGGC 599278 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 ||||| || |||| ||||||||| || ||| || || |||||||||||||| |||| Sbjct 599279 TCAAGAAGCGGGGGCTCATGCCCGGCCTCACCTTCTCGAATGAGCTCATCAGCAGAGACG 599338 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCT 26033 |||| | |||| || ||||| ||||| Sbjct 599339 AGGGCATGCACACCGACTTTGCGTGCCT 599366 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 26152 GGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGC 26211 ||||||||| | |||||| |||||||||| |||| || ||||||| |||||| | Sbjct 596347 GGCATGAACTCGAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGACCGTCTGCTCGTC 596288 Query 26212 CAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATA 26271 ||| || || | |||||| || | ||||| || ||||| ||||| | || Sbjct 596287 GCGCTCGGTGACGAGAAGGTCTACAACGCGACCAACCCCTTTGACTTCATGGACATGATC 596228 Query 26272 TCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTA 26318 ||| | | || |||||||||||||| || ||| |||| |||||| Sbjct 596227 TCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGGGTGTCCGACTA 596181 >seq35 Length=923662 Score = 96.9 bits (106), Expect = 6e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 221750 TACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTA 221809 |||| |||||||| || || ||||| |||||||||| || |||| | || ||| Sbjct 866276 TACTCGATGATCTCCGTGCACAGGTTTGACGACTTGATGGTGCCGAGGTTCTGCTGGTTA 866335 Query 221810 GACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCC 221869 ||||| |||||||| |||||||||||||| ||||| || |||||||| | || ||| Sbjct 866336 GACTTCGCATTGGCAGAATCCTTGTAGAGCATGAAGGGTCCACCAGTCTCGATTTGCGCC 866395 Query 221870 ACCAGAAT 221877 ||||||| Sbjct 866396 TCCAGAAT 866403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842779762560