Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq98 87.8 1e-11 >seq98 Length=2497588 Score = 87.8 bits (96), Expect = 1e-11 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| || | ||||| | | ||| || || ||||| || || || || || |||||| Sbjct 2387925 TTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGTTGT 2387866 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || ||||| |||||||||||||| ||||| || || ||||| || || Sbjct 2387865 TGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTCGCCTTCACGTTGTCAATGGTGTCC 2387806 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | | ||||||||| || || || || ||||| ||||| ||||| || || Sbjct 2387805 GATGACTCGA-CTTCAAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTG 2387750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268171736295752