Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 seq98 96.9 4e-15 >seq1 Length=2640167 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/218 (71%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 64982 AGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAA 65041 |||| | || || |||||| | || | || || ||| |||||||||| | ||||| Sbjct 596769 AGCACCTGTTCGACGCCATCGAGACCATCCCCTGCATTAAGAAGAAGGCCGATTGGGCCC 596710 Query 65042 TGAAATGGTT---TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGT 65098 | ||| | ||||| || ||| |||||||| ||||||||| | ||||| || Sbjct 596709 TCCGCTGGATCTCTGACAAGAAATCT---TCCTTCGCTGAGCGCCTTGTCGCGTTCGCCG 596653 Query 65099 GTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGG 65157 || ||||||||||||||||| || || ||| ||| | || | ||| | |||||||| Sbjct 596652 CCGTCGAGGGTATCTTCTTCTCTGGTTCCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGT 596594 Query 65158 GGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTAT 65195 || |||||||| || || |||||| || || || || Sbjct 596593 GGACTCATGCCCGGTCTCACCTTCTCGAACGAGCTCAT 596556 >seq98 Length=2497588 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 ||||| ||||| || || || ||| |||| | ||| || ||||| || ||||||||| Sbjct 1729931 GGTGCTAAGATTCCTCGCGGTGCCATTCTTTCCGGTCCTCCCGGTACTGGTAAGACCCTC 1729990 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394 |||||| ||||| |||||| ||| | |||||||| ||| | | ||| || | | | | Sbjct 1729991 CTCGCCAAAGCCACCGCGGGCGAAGCCAATGTCCCCTTCTTTTCCGTG-TCCGGCTCCGA 1730049 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 || || || ||||| || ||||| || || | || || || ||||||| || || Sbjct 1730050 GTTCGTCGAAATGTTCGTCGGTGTCGGCTCCTCTCGCGTCCGGGACCTCTTTGCCATGGC 1730109 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 | | || || || ||||||||| | ||||| || ||||| Sbjct 1730110 CAAGAAGAACGCGCCGTGCATTGTCTTCGTGGATGAAATCGATGC 1730154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568302461120