Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq98 102 2e-16 >seq98 Length=2497588 Score = 102 bits (112), Expect = 2e-16 Identities = 169/244 (69%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 251408 TAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGAC 251467 |||| ||||| | | || || || | | ||| |||||| || ||| | || || Sbjct 868139 TAAGGCCACAAATGTCGCAAACGTGCAGTCGGTAGGCATCACTGGCTTCAAACAGACGCT 868198 Query 251468 CCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAAC 251527 |||| |||| || ||||||| || ||||| || ||||||||||| || ||||||| Sbjct 868199 CCTTCAAGAAGGCAGCCACACCGTGCGAGATCATGCAGTCACGCTCCATCTCTCCGAAAC 868258 Query 251528 GAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGAC 251587 | ||||||||||| ||| | ||| ||| | ||||| |||||||| | || || | Sbjct 868259 GGAGACCACCATCTCGACTACGACCTTCGACGGGCTGGCGAGTGAGGATCTGCACTGGGC 868318 Query 251588 CGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGG 251647 || | || || ||| || | ||||| || ||||||||||||||| ||| | Sbjct 868319 CGCGTGCACGTGAGTGGATCTTGTCGTCGACCATGTGTTTGAGACGCTGGTAGTATGTTG 868378 Query 251648 GACC 251651 |||| Sbjct 868379 GACC 868382 Score = 87.8 bits (96), Expect = 5e-12 Identities = 110/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Plus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| |||||||| |||||| || || || ||||| |||| ||| || | | || | Sbjct 868574 CGATGGTCATACGGGAGGGAATGGCGTGAGGGTTGATAATGAGGTCAGGCGTGATACCTT 868633 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTTTGTC 251959 | || ||||||||||||||| |||| | ||| || | || || || |||||||| | Sbjct 868634 CCGCCGTGAAGGGCATATCC---TCCTGACGATAGGTGATACCGATCGTACCCTTTTGAC 868690 Query 251960 CGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||| ||| |||||| || ||||| Sbjct 868691 CGTGACGCGAAGCGAACTTGTCTCCAAT 868718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814318766638